DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and LOC1271114

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_309860.5 Gene:LOC1271114 / 1271114 VectorBaseID:AGAMI1_001991 Length:346 Species:Anopheles gambiae


Alignment Length:281 Identity:68/281 - (24%)
Similarity:118/281 - (41%) Gaps:51/281 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 WSLC-NKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRI---SGLITNTGHSVIFTAGNDTVANYDG 108
            |||. .:..:.:|:::...|.: :..|.|:..:.:.:   |..:||||.:||.:      |.:|.
Mosquito    28 WSLAPTEAYQPAPIDIAVCRAV-ELELEPLRWNNYELLPASVKLTNTGETVILS------ARWDS 85

  Fly   109 MQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQIFGYNSQLYANFSDALNR 173
            .|.| ::.||||..||.|.::|.|:||:...||||:::||..|.|:.:..: ::.:.:...|...
Mosquito    86 EQCP-SLEGGPLEGRYLFSQLHFHWGLSALDGSEHTIDGYRLPLELHVIHF-AERFGDQDTAQAS 148

  Fly   174 AQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLSIRGLLPD-------------- 224
            ..|::.:.....|....|..:..:.:.||||                |||:              
Mosquito   149 PGGVLCLVYFFNLKSNPNRFVEPVVEALERI----------------LLPESYTKLEPFPLIDLF 197

  Fly   225 ---TDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAPL--GNNYRP 284
               ||.|..|.|.|........:.|::......:..:||....||:.... .|:..|  .:..||
Mosquito   198 HAFTDEYFLYWGCTRNGPQVTPLLWLLSRTQEPLDFRQLKQFNRLLDRRM-RPRCSLQPSDTARP 261

  Fly   285 P--QPLLHRPIRTNIDFKTTK 303
            .  :.|.|...||.:...|.:
Mosquito   262 SKGRHLFHVNPRTPMSVSTLR 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 67/274 (24%)
LOC1271114XP_309860.5 None

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