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Protein Alignment CARPB and Car5a

DIOPT Version :9

Sequence 1:	NP_001245593.1	Gene:	CARPB / 31915	FlyBaseID:	FBgn0052698	Length:	327	Species:	Drosophila melanogaster
Sequence 2:	NP_031634.2	Gene:	Car5a / 12352	MGIID:	101946	Length:	299	Species:	Mus musculus

Alignment Length:	284	Identity:	91/284 - (32%)
Similarity:	137/284 - (48%)	Gaps:	25/284 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly    36 SGPAFWGL------------INPEWS---LCNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRIS- 84
            :||..|..            .:|.|:   ...:|.||||:|::.:..::||.|.|:.:.....|
Mouse    22 TGPQRWRFQHSCAEEHSNCARHPLWTGPVSSAEGTRQSPINIQWKDSVYDPQLAPLRVSYDAASC 86

  Fly    85 GLITNTGHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYT 149
            ..:.|||:  .|....|......|      ||||||...||..:.|.|:|..|::||||:|:|:|
Mouse    87 RYLWNTGY--FFQVEFDDSCEDSG------ISGGPLGNHYRLKQFHFHWGATDEWGSEHAVDGHT 143

  Fly   150 FPAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVK 214
            :|||:.:..:||..|.|:..|.....|:..:.:.|:||....| |:.|.|.|..:|:...:..:.
Mouse   144 YPAELHLVHWNSTKYENYKKASVGENGLAVIGVFLKLGAHHQA-LQKLVDVLPEVRHKDTQVAMG 207

  Fly   215 RLSIRGLLPDTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAPLG 279
            ......|||....|.||.||.|.|...|:|||:|...|:.::..||...|.|:.......:..:.
Mouse   208 PFDPSCLLPACRDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSTFRTLLFSGRGEEEDVMV 272

  Fly   280 NNYRPPQPLLHRPIRTNIDFKTTK 303
            |||||.|||..|.:|::.....||
Mouse   273 NNYRPLQPLRDRKLRSSFRLDRTK 296

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.