DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CARPB and Car5a

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_031634.2 Gene:Car5a / 12352 MGIID:101946 Length:299 Species:Mus musculus


Alignment Length:284 Identity:91/284 - (32%)
Similarity:137/284 - (48%) Gaps:25/284 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SGPAFWGL------------INPEWS---LCNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRIS- 84
            :||..|..            .:|.|:   ...:|.||||:|::.:..::||.|.|:.:.....| 
Mouse    22 TGPQRWRFQHSCAEEHSNCARHPLWTGPVSSAEGTRQSPINIQWKDSVYDPQLAPLRVSYDAASC 86

  Fly    85 GLITNTGHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYT 149
            ..:.|||:  .|....|......|      ||||||...||..:.|.|:|..|::||||:|:|:|
Mouse    87 RYLWNTGY--FFQVEFDDSCEDSG------ISGGPLGNHYRLKQFHFHWGATDEWGSEHAVDGHT 143

  Fly   150 FPAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVK 214
            :|||:.:..:||..|.|:..|.....|:..:.:.|:||....| |:.|.|.|..:|:...:..:.
Mouse   144 YPAELHLVHWNSTKYENYKKASVGENGLAVIGVFLKLGAHHQA-LQKLVDVLPEVRHKDTQVAMG 207

  Fly   215 RLSIRGLLPDTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAPLG 279
            ......|||....|.||.||.|.|...|:|||:|...|:.::..||...|.|:.......:..:.
Mouse   208 PFDPSCLLPACRDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSTFRTLLFSGRGEEEDVMV 272

  Fly   280 NNYRPPQPLLHRPIRTNIDFKTTK 303
            |||||.|||..|.:|::.....||
Mouse   273 NNYRPLQPLRDRKLRSSFRLDRTK 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 89/276 (32%)
Car5aNP_031634.2 alpha_CA_V 55..290 CDD:239392 84/243 (35%)

Return to query results.
Submit another query.