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Protein Alignment CARPB and Car2

DIOPT Version :9

Sequence 1:	NP_001245593.1	Gene:	CARPB / 31915	FlyBaseID:	FBgn0052698	Length:	327	Species:	Drosophila melanogaster
Sequence 2:	NP_001344263.1	Gene:	Car2 / 12349	MGIID:	88269	Length:	260	Species:	Mus musculus

Alignment Length:	273	Identity:	91/273 - (33%)
Similarity:	137/273 - (50%)	Gaps:	19/273 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly    30 WTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHI--DKHRISGLITNTGH 92
            |.|...:||..|   :.::.:.| |.|||||:::......||.|:|:.|  || ..|..|.|.||
Mouse     5 WGYSKHNGPENW---HKDFPIAN-GDRQSPVDIDTATAQHDPALQPLLISYDK-AASKSIVNNGH 64

  Fly    93 SVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQIF 157
            |  |.      ..:|..|....:.|||||..||..:.|.|:|.:|..||||:|....:.||:.:.
Mouse    65 S--FN------VEFDDSQDNAVLKGGPLSDSYRLIQFHFHWGSSDGQGSEHTVNKKKYAAELHLV 121

  Fly   158 GYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLSIRGLL 222
            .:|:: |.:|..|:.:..|:..:.|.|::|..|.. |:.:.:.|..|:..|..|.........||
Mouse   122 HWNTK-YGDFGKAVQQPDGLAVLGIFLKIGPASQG-LQKVLEALHSIKTKGKRAAFANFDPCSLL 184

  Fly   223 PDTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQP 287
            |....|.||.||.|.|...|.|||:||.:||.::.:|:...|.|........:..:.:|:||.||
Mouse   185 PGNLDYWTYPGSLTTPPLLECVTWIVLREPITVSSEQMSHFRTLNFNEEGDAEEAMVDNWRPAQP 249

  Fly   288 LLHRPIRTNIDFK 300
            |.:|.|:.:  ||
Mouse   250 LKNRKIKAS--FK 260

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.