DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and Car8

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_031618.2 Gene:Car8 / 12319 MGIID:88253 Length:291 Species:Mus musculus


Alignment Length:283 Identity:85/283 - (30%)
Similarity:140/283 - (49%) Gaps:40/283 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 DWWTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRI---SGLITN 89
            :|...:|:.    |||:.|:    ..|..|||:||..:...:||:|..:.:..:.:   ...:||
Mouse    29 EWGYEEGVE----WGLVFPD----ANGEYQSPINLNSREARYDPSLLDVRLSPNYVVCRDCEVTN 85

  Fly    90 TGHSVIFTAGNDTVANYDGMQTPVNISGGPL--SYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPA 152
            .||::.....:.:|           :|||||  ...:..:|:..|:|..:|.||||:|....||.
Mouse    86 DGHTIQVILKSKSV-----------LSGGPLPQGQEFELYEVRFHWGRENQRGSEHTVNFKAFPM 139

  Fly   153 EIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLS 217
            |:.:..:||.|:.:..:|:.:..||..:::.:|:|. .:..|:.:|:.|:.|:|.|....:...:
Mouse   140 ELHLIHWNSTLFGSIDEAVGKPHGIAIIALFVQIGK-EHVGLKAVTEILQDIQYKGKSKTIPCFN 203

  Fly   218 IRGLLPD--TDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAP--- 277
            ...||||  ...|..|:||.|.|.|.|.|||::...|:.|::.|:...|||.    .|.|..   
Mouse   204 PNTLLPDPLLRDYWVYEGSLTIPPCSEGVTWILFRYPLTISQMQIEEFRRLR----THVKGAELV 264

  Fly   278 ------LGNNYRPPQPLLHRPIR 294
                  ||:|:||.|||..|.||
Mouse   265 EGCDGILGDNFRPTQPLSDRVIR 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 83/274 (30%)
Car8NP_031618.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
alpha_CARP_VIII 36..290 CDD:239394 83/276 (30%)
Blue background indicates that the domain is not in the aligned region.

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