DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and ca1

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_002939198.1 Gene:ca1 / 100496485 XenbaseID:XB-GENE-957160 Length:262 Species:Xenopus tropicalis


Alignment Length:269 Identity:83/269 - (30%)
Similarity:139/269 - (51%) Gaps:16/269 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHI--DKHRISGLITNTGH 92
            |.||..:||..|..:.|   :.| |..|||::::......|.:|:.:.|  :...|..|: |.||
 Frog     6 WGYDSHNGPDQWHKLYP---IAN-GDSQSPIDVKSGEAKADESLKSLSIRYNSDSIKSLV-NVGH 65

  Fly    93 SVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQIF 157
            |....|        :..:.|..::.|||...||.::.|.|:|.::.|||||:|:|..:.||:.:.
 Frog    66 SFQVLA--------EDKENPSVVAQGPLKATYRLNQFHFHWGASNDFGSEHTVDGKGYAAELHLV 122

  Fly   158 GYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLSIRGLL 222
            .:||..|::|::|.....|...|::.:::|. |:..|:.:.:.||.|...|.:|.........||
 Frog   123 HWNSDKYSSFAEASKNPDGCAVVTVFIKVGS-SHPGLQRVVEALELIAAKGKQAAFTNFDASTLL 186

  Fly   223 PDTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQP 287
            |.:..|.||.||.|.|...|.|||::..:||..:.:|::..||::..:......|:..|:||.||
 Frog   187 PASMDYWTYQGSLTHPPLLECVTWIIFKEPISASSEQINLFRRILSSAEGEEACPVLANHRPTQP 251

  Fly   288 LLHRPIRTN 296
            |..|.:|.:
 Frog   252 LKGREVRAS 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 80/262 (31%)
ca1XP_002939198.1 alpha_CA 2..261 CDD:469577 83/269 (31%)

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