DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and ca1

DIOPT Version :9

Sequence 1:NP_001245593.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_002939198.1 Gene:ca1 / 100496485 XenbaseID:XB-GENE-957160 Length:262 Species:Xenopus tropicalis


Alignment Length:269 Identity:83/269 - (30%)
Similarity:139/269 - (51%) Gaps:16/269 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHI--DKHRISGLITNTGH 92
            |.||..:||..|..:.|   :.| |..|||::::......|.:|:.:.|  :...|..|: |.||
 Frog     6 WGYDSHNGPDQWHKLYP---IAN-GDSQSPIDVKSGEAKADESLKSLSIRYNSDSIKSLV-NVGH 65

  Fly    93 SVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQIF 157
            |....|        :..:.|..::.|||...||.::.|.|:|.::.|||||:|:|..:.||:.:.
 Frog    66 SFQVLA--------EDKENPSVVAQGPLKATYRLNQFHFHWGASNDFGSEHTVDGKGYAAELHLV 122

  Fly   158 GYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLSIRGLL 222
            .:||..|::|::|.....|...|::.:::|. |:..|:.:.:.||.|...|.:|.........||
 Frog   123 HWNSDKYSSFAEASKNPDGCAVVTVFIKVGS-SHPGLQRVVEALELIAAKGKQAAFTNFDASTLL 186

  Fly   223 PDTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQP 287
            |.:..|.||.||.|.|...|.|||::..:||..:.:|::..||::..:......|:..|:||.||
 Frog   187 PASMDYWTYQGSLTHPPLLECVTWIIFKEPISASSEQINLFRRILSSAEGEEACPVLANHRPTQP 251

  Fly   288 LLHRPIRTN 296
            |..|.:|.:
 Frog   252 LKGREVRAS 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_001245593.1 alpha_CARP_X_XI_like 37..298 CDD:239395 80/262 (31%)
ca1XP_002939198.1 alpha_CA 2..261 CDD:381753 83/269 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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