DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and ca3

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_002939197.2 Gene:ca3 / 100496328 XenbaseID:XB-GENE-1007186 Length:262 Species:Xenopus tropicalis


Alignment Length:272 Identity:80/272 - (29%)
Similarity:135/272 - (49%) Gaps:19/272 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRISGL-ITNTGHS 93
            |.|...:||..|.    |:....||.:|||:.|..:.:..||.|||.....|..:.| :.|.|.:
 Frog     7 WGYASHNGPDTWA----EYFPAAKGDQQSPIELLTRYIKHDPTLRPWTSTYHPSTSLTVVNDGTT 67

  Fly    94 --VIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQI 156
              |:|....|...          |..||::..||..::..|:|.:|..||||.::|:.:..|:..
 Frog    68 CRVVFDDSTDKSV----------IKDGPMNGTYRLRQLQFHWGSSDDHGSEHVIDGFRYAGEMHF 122

  Fly   157 FGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLSIRGL 221
            ..:||: |.|.::|.....|:..:::.|::|. :...|:::.:.|:.|:..|.:|.........|
 Frog   123 IHWNSK-YDNITEAKKHPDGVAIIAVFLKIGK-AKPHLKLVLEALDCIKNKGKKAHFTDFDPTIL 185

  Fly   222 LPDTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQ 286
            .|.:..|.||.||.|.|.|.|.|||::|::||.::.:|:...|.:........:..:.:|:||||
 Frog   186 FPSSRDYWTYQGSFTTPPCEECVTWLLLSEPITVSPEQMEKFRSVYSTLEGEIECHMVDNFRPPQ 250

  Fly   287 PLLHRPIRTNID 298
            |:..|.||.:.|
 Frog   251 PVKGREIRASFD 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 77/263 (29%)
ca3XP_002939197.2 alpha_CA 4..261 CDD:469577 79/269 (29%)

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