DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and ca10

DIOPT Version :9

Sequence 1:NP_001245593.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_031750638.1 Gene:ca10 / 100493207 XenbaseID:XB-GENE-949649 Length:328 Species:Xenopus tropicalis


Alignment Length:333 Identity:134/333 - (40%)
Similarity:197/333 - (59%) Gaps:28/333 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLQALCCTLLLLLARMQVLLAVSWEDWWTY-DGISG-----PAFWGLINPEWSLCNKGRRQSPVN 61
            :|||   :|::.::..|....:. |.|||| :.:.|     |:||||:|..|:||..|:||||||
 Frog    10 ILQA---SLIVCMSAQQNSPKIH-EGWWTYKEVVQGSFVPVPSFWGLVNSAWNLCAVGKRQSPVN 70

  Fly    62 LEPQRLLFDPNLRPMHIDK--HRISGLITNTGHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRY 124
            :|...::|||.|.|:.|:.  .::||.:.|||..|......:.:         ||||||||:|.:
 Frog    71 IETSHMIFDPFLTPLRINTGGRKVSGTMYNTGRHVSLRLDKEHL---------VNISGGPLTYSH 126

  Fly   125 RFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDL 189
            |..||.:|:|..|..||||.:.|..|..|:|:..||.:||.|.:||.....|:|.:||.:::.|.
 Frog   127 RLEEIRLHFGSEDGQGSEHLLNGQAFSGEVQLIHYNHELYTNVTDAAKSPNGLVVISIFIKVTDS 191

  Fly   190 SNAEL-RMLT-DQLERIRYGGDEAFVKRLSIRGLLPDTDHYMTYDGSTTAPACHETVTWVVLNKP 252
            ||..| |||. |.:.||.|..|...::.|:|..:.|:|..::|||||.|.|.|:||.:|:::|||
 Frog   192 SNLFLNRMLNRDTITRITYKNDAYLLQGLNIEEIYPETSSFITYDGSMTIPPCYETASWIIMNKP 256

  Fly   253 IYITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQPLLHRPIRTNIDFKTTKSNGKAACP-TMYRE 316
            ||||:.|:|:||.|.|..|....:.:.:|:||.|.|.:|.|||||:|:.   .|| .|| ...::
 Frog   257 IYITRMQMHSLRLLSQNQPSQIFSSMSDNFRPVQSLNNRCIRTNINFRL---QGK-DCPNNRAQK 317

  Fly   317 VYYKATSW 324
            :.||...|
 Frog   318 LQYKVNEW 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_001245593.1 alpha_CARP_X_XI_like 37..298 CDD:239395 115/269 (43%)
ca10XP_031750638.1 alpha_CARP_X_XI_like 46..302 CDD:239395 114/264 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 231 1.000 Domainoid score I2386
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H23201
Inparanoid 1 1.050 242 1.000 Inparanoid score I3233
OMA 1 1.010 - - QHG45680
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0002299
OrthoInspector 1 1.000 - - mtm9493
Panther 1 1.100 - - LDO PTHR18952
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8915
SonicParanoid 1 1.000 - - X1354
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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