DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and Car10

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001414698.1 Gene:Car10 / 100360015 RGDID:2322930 Length:328 Species:Rattus norvegicus


Alignment Length:331 Identity:132/331 - (39%)
Similarity:191/331 - (57%) Gaps:30/331 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLLLLARMQVLLAVS------WEDWWTY-DGISG-----PAFWGLINPEWSLCNKGRRQSPVNLE 63
            |.||.|...|.::..      .|.||.| :.:.|     |:||||:|..|:||:.|:||||||:|
  Rat     8 LFLLQANFIVCISAQQNSPKIHEGWWAYKEVVQGSFVPVPSFWGLVNSAWNLCSVGKRQSPVNIE 72

  Fly    64 PQRLLFDPNLRPMHIDK--HRISGLITNTGHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRF 126
            ...::|||.|.|:.|:.  .::||.:.|||..|......:.:         |||||||::|.:|.
  Rat    73 TSHMIFDPFLTPLRINTGGRKVSGTMYNTGRHVSLRLDKEHL---------VNISGGPMTYSHRL 128

  Fly   127 HEIHMHYGLNDQFGSEHSVEGYTFPAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSN 191
            .||.:|:|..|..||||.:.|..|..|:|:..||.:||.|.::|.....|:|.|||.:::.|.||
  Rat   129 EEIRLHFGSEDSQGSEHLLNGQAFSGEVQLIHYNHELYTNVTEAAKSPNGLVVVSIFIKVSDSSN 193

  Fly   192 AEL-RMLT-DQLERIRYGGDEAFVKRLSIRGLLPDTDHYMTYDGSTTAPACHETVTWVVLNKPIY 254
            ..| |||. |.:.||.|..|...::.|:|..|.|:|..::|||||.|.|.|:||.:|:::|||:|
  Rat   194 PFLNRMLNRDTITRITYKNDAYLLQGLNIEELYPETSSFITYDGSMTIPPCYETASWIIMNKPVY 258

  Fly   255 ITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQPLLHRPIRTNIDFKTTKSNGKAACP-TMYREVY 318
            ||:.|:|:||.|.|..|......:.:|:||.|||.:|.|||||:|..   .|| .|| ...:::.
  Rat   259 ITRMQMHSLRLLSQNQPSQIFLSMSDNFRPVQPLNNRCIRTNINFSL---QGK-DCPNNRAQKLQ 319

  Fly   319 YKATSW 324
            |:...|
  Rat   320 YRVNEW 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 115/269 (43%)
Car10NP_001414698.1 None

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