DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1354 and ychF

DIOPT Version :10

Sequence 1:NP_001356937.1 Gene:CG1354 / 31914 FlyBaseID:FBgn0030151 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_415721.1 Gene:ychF / 945769 ECOCYCID:EG11404 Length:363 Species:Escherichia coli


Alignment Length:368 Identity:162/368 - (44%)
Similarity:232/368 - (63%) Gaps:13/368 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIGIVGVPNVGKSTFFNVLTQSAAPAENFPFCTIKPNESRVPVPDERFDYLVEYHKPASVVPAYL 87
            :.||||:|||||||.||.||::...|.|||||||:||...||:||.|.|.|.|..||...:|..:
E. coli     4 KCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTM 68

  Fly    88 NVVDIAGLVKGAAEGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRDLEIISEELR 152
            ..||||||||||::|:||||.||::|...:||.|:.|.||:.::.||.|:|:|..|:|:|:.||.
E. coli    69 EFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELA 133

  Fly   153 LKDEENLLKNLDKLEKVVARGGDKKLKPEYDSMLKIKDILIDQKRH---LRFEDWNAHDIEALNK 214
            |.|.:...:.:.:::| .|:||||..|.|    |.:.:..:.|..:   ||..|.:|.:..|:..
E. coli   134 LADLDTCERAIHRVQK-KAKGGDKDAKAE----LAVLEKCLPQLENAGMLRALDLSAEEKAAIRY 193

  Fly   215 YLFLTSKPVIYLVNLSDKDFIRKKNKWLPKIKEWIDKNDPGALLIPFSGAFEHQLTEKDELERKA 279
            ..|||.||.:|:.|:::..|  :.|.:|.:::|...|.  |::::|...|.|..:.|.|:.||..
E. coli   194 LSFLTLKPTMYIANVNEDGF--ENNPYLDQVREIAAKE--GSVVVPVCAAVEADIAELDDEERDE 254

  Fly   280 YETETKCKSM-LEKIVVTGYKGLQLEYFFTAGPDEVKAWTIQKGTKAPQAAGRIHTDFEKGFIMA 343
            :..|...:.. |.:::..|||.|.|:.:||||..||:||||..|..||||||:||||||||||.|
E. coli   255 FMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRA 319

  Fly   344 EVMHFEDFKAEGSEANAKAAGKYRQQGRNYTVEDGDIIFFKFN 386
            :.:.||||.....|..||.|||.|.:|::|.|:|||::.|.||
E. coli   320 QTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFLFN 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1354NP_001356937.1 PTZ00258 1..387 CDD:240334 162/368 (44%)
ychFNP_415721.1 GTP1 3..363 CDD:439783 162/368 (44%)

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