DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and klf6b

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_001920652.3 Gene:klf6b / 793760 ZFINID:ZDB-GENE-070912-633 Length:245 Species:Danio rerio


Alignment Length:211 Identity:73/211 - (34%)
Similarity:98/211 - (46%) Gaps:25/211 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 SENYSSALSHSLLGSGQHLLQDTYKSMLPGQGVGVGVGVGMGGFSLPHSSPSAAAAAAA------ 329
            :|.|.||.....:....||.....:.      .|....:...|.|:|.....||:..::      
Zfish    45 NEPYVSAADLRSVCESDHLWSQFVRC------CGTEANLSPPGASIPRQDEIAASCHSSFGSCEK 103

  Fly   330 -TAAAAAGGSPQGGSPSTPSPRSQRRYAGRATCDCPNCQEAERLGPAGVHLR-------KKNIHS 386
             .|:|.....|.|.:.|     .|:..........|:..:.:..||.|..:|       ::..|.
Zfish   104 IIASADVHTHPLGHNAS-----EQQCVIAHTPPSSPSLVKEDADGPRGEEVRCEGSPEGRRRAHR 163

  Fly   387 CHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCN 451
            |:..||.|||.|:||||||.|.||||:|:.|:|..|..||.|||||.||.|.|||.|.|.|..|:
Zfish   164 CYFNGCRKVYTKSSHLKAHQRTHTGEKPYRCSWEGCEWRFARSDELTRHFRKHTGAKPFKCSHCD 228

  Fly   452 KRFMRSDHLAKHVKTH 467
            :.|.||||||.|:|.|
Zfish   229 RCFSRSDHLALHMKRH 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 23/128 (18%)
C2H2 Zn finger 390..409 CDD:275368 13/18 (72%)
zf-H2C2_2 401..428 CDD:463886 16/26 (62%)
C2H2 Zn finger 417..439 CDD:275368 13/21 (62%)
zf-H2C2_2 431..454 CDD:463886 12/22 (55%)
zf-C2H2 445..467 CDD:395048 12/21 (57%)
C2H2 Zn finger 447..467 CDD:275368 11/19 (58%)
klf6bXP_001920652.3 None

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