DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp1 and Sp2

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_084496.2 Gene:Sp2 / 78912 MGIID:1926162 Length:613 Species:Mus musculus


Alignment Length:615 Identity:165/615 - (26%)
Similarity:221/615 - (35%) Gaps:228/615 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 TPLAMLAAQCNKLSNKSPPPLADAAV---------GKGFHPWKKS--PNSPAAGSSGSSGGGGG- 98
            :|||:|||.|:|:.    ||..:|||         .:...|.|.:  |.||...|.......|. 
Mouse    34 SPLALLAATCSKIG----PPAVEAAVTPPAPPQPTPRKLVPIKPAPLPLSPCKNSFSILSSKGNI 94

  Fly    99 -------------GGGSSAGQHSPCAISAASSSSSS-----GSSGGQSSRSL------------- 132
                         ||.......:|..|:..|.|::|     ....|.||:::             
Mouse    95 LQIQGSQLSTSYPGGQFVFAIQNPTLINKGSRSNASIQYQVPQIQGNSSQTIQVQPSLTNQIQVI 159

  Fly   133 --SSSASTMVNITASRPLASSCAAVGGGSTGSSSSASGSQSSSTASAVAAAYGGDLYFPNTSTSN 195
              ::.|.|..:.:..:|:....|.|...||.::...||      |:.|....||         ||
Mouse   160 PGTNQAITTPSTSGHKPVPIKPAPVQKSSTTTTPVQSG------ANVVKLTGGG---------SN 209

  Fly   196 MDNHHMHQGLLGKVEAGAAAFGGVYSRHPYDWPFNAVTHKEAASVNSGWWDMHSAAGSWLDMGGA 260
            |........|:...:.|..|  .:.:..| ..|.:. |:|:|...:........|....::    
Mouse   210 MTLTLPLNNLVNTSDIGGPA--QLLTESP-PTPLSK-TNKKARKKSLPVSQPSVAVAEQVE---- 266

  Fly   261 GMHSTMANYASENYSSALSHSLL----GSGQHLL-----------QDTYKSMLPGQGVGVGVGVG 310
               :.:....::|...|.::.|:    |.||..:           :......:|.|.:.|   |.
Mouse   267 ---TVLIETTADNIIQAGNNLLIVQSPGGGQPAVVQQVQVVPPKAEQQQVVQIPQQALRV---VQ 325

  Fly   311 MGGFSLP------------------------------------HSSPSAAAA------------- 326
            ....:||                                    ..||.|.||             
Mouse   326 AASATLPTVPQKPSQNFQIQTTEPTPTQVYIRTPSGEVQTVLVQDSPPATAATTSTVTCNSPALR 390

  Fly   327 -----------------------------------AAATAAAA---------------------- 334
                                               ||..||||                      
Mouse   391 APHLSGTSKKHSAAILRKERPLPKIAPAGSIISLNAAQLAAAAQAMQTININGVQVQGVPVTITN 455

  Fly   335 AGGSPQ--------------GGSPSTPSPRSQRRYAG---------RATCDCPNCQEAE-RLGPA 375
            .||..|              |.||:....:.::..||         |..|.||||::.| |.|..
Mouse   456 TGGQQQLTVQNVSGNNLTISGLSPTQIQLQMEQALAGEAQPGEKRRRMACTCPNCKDGEKRSGEQ 520

  Fly   376 GVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHT 440
            |   :||  |.||||.|||.:.|||.|:||:|.|||||||||||.|||||||||||||||.||||
Mouse   521 G---KKK--HVCHIPDCGKTFRKTSLLRAHVRLHTGERPFVCNWFFCGKRFTRSDELQRHARTHT 580

  Fly   441 GEKRFACPVCNKRFMRSDHLAKHVKTHNGT 470
            |:|||.|..|.|||||||||.||.|||.||
Mouse   581 GDKRFECAQCQKRFMRSDHLTKHYKTHLGT 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 95/525 (18%)
C2H2 Zn finger 390..409 CDD:275368 11/18 (61%)
zf-H2C2_2 401..428 CDD:463886 21/26 (81%)
C2H2 Zn finger 417..439 CDD:275368 19/21 (90%)
zf-H2C2_2 431..454 CDD:463886 16/22 (73%)
zf-C2H2 445..467 CDD:395048 15/21 (71%)
C2H2 Zn finger 447..467 CDD:275368 14/19 (74%)
Sp2NP_084496.2 SP2_N 10..526 CDD:411776 98/529 (19%)
C2H2 Zn finger 530..549 CDD:275368 11/18 (61%)
zf-H2C2_2 542..568 CDD:463886 21/25 (84%)
C2H2 Zn finger 557..579 CDD:275368 19/21 (90%)
zf-H2C2_2 571..594 CDD:463886 16/22 (73%)
zf-C2H2 585..607 CDD:395048 15/21 (71%)
C2H2 Zn finger 587..607 CDD:275368 14/19 (74%)

Return to query results.
Submit another query.