DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp1 and Sp2

DIOPT Version :9

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_084496.2 Gene:Sp2 / 78912 MGIID:1926162 Length:613 Species:Mus musculus


Alignment Length:615 Identity:165/615 - (26%)
Similarity:221/615 - (35%) Gaps:228/615 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 TPLAMLAAQCNKLSNKSPPPLADAAV---------GKGFHPWKKS--PNSPAAGSSGSSGGGGG- 98
            :|||:|||.|:|:.    ||..:|||         .:...|.|.:  |.||...|.......|. 
Mouse    34 SPLALLAATCSKIG----PPAVEAAVTPPAPPQPTPRKLVPIKPAPLPLSPCKNSFSILSSKGNI 94

  Fly    99 -------------GGGSSAGQHSPCAISAASSSSSS-----GSSGGQSSRSL------------- 132
                         ||.......:|..|:..|.|::|     ....|.||:::             
Mouse    95 LQIQGSQLSTSYPGGQFVFAIQNPTLINKGSRSNASIQYQVPQIQGNSSQTIQVQPSLTNQIQVI 159

  Fly   133 --SSSASTMVNITASRPLASSCAAVGGGSTGSSSSASGSQSSSTASAVAAAYGGDLYFPNTSTSN 195
              ::.|.|..:.:..:|:....|.|...||.::...||      |:.|....||         ||
Mouse   160 PGTNQAITTPSTSGHKPVPIKPAPVQKSSTTTTPVQSG------ANVVKLTGGG---------SN 209

  Fly   196 MDNHHMHQGLLGKVEAGAAAFGGVYSRHPYDWPFNAVTHKEAASVNSGWWDMHSAAGSWLDMGGA 260
            |........|:...:.|..|  .:.:..| ..|.:. |:|:|...:........|....::    
Mouse   210 MTLTLPLNNLVNTSDIGGPA--QLLTESP-PTPLSK-TNKKARKKSLPVSQPSVAVAEQVE---- 266

  Fly   261 GMHSTMANYASENYSSALSHSLL----GSGQHLL-----------QDTYKSMLPGQGVGVGVGVG 310
               :.:....::|...|.::.|:    |.||..:           :......:|.|.:.|   |.
Mouse   267 ---TVLIETTADNIIQAGNNLLIVQSPGGGQPAVVQQVQVVPPKAEQQQVVQIPQQALRV---VQ 325

  Fly   311 MGGFSLP------------------------------------HSSPSAAAA------------- 326
            ....:||                                    ..||.|.||             
Mouse   326 AASATLPTVPQKPSQNFQIQTTEPTPTQVYIRTPSGEVQTVLVQDSPPATAATTSTVTCNSPALR 390

  Fly   327 -----------------------------------AAATAAAA---------------------- 334
                                               ||..||||                      
Mouse   391 APHLSGTSKKHSAAILRKERPLPKIAPAGSIISLNAAQLAAAAQAMQTININGVQVQGVPVTITN 455

  Fly   335 AGGSPQ--------------GGSPSTPSPRSQRRYAG---------RATCDCPNCQEAE-RLGPA 375
            .||..|              |.||:....:.::..||         |..|.||||::.| |.|..
Mouse   456 TGGQQQLTVQNVSGNNLTISGLSPTQIQLQMEQALAGEAQPGEKRRRMACTCPNCKDGEKRSGEQ 520

  Fly   376 GVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHT 440
            |   :||  |.||||.|||.:.|||.|:||:|.|||||||||||.|||||||||||||||.||||
Mouse   521 G---KKK--HVCHIPDCGKTFRKTSLLRAHVRLHTGERPFVCNWFFCGKRFTRSDELQRHARTHT 580

  Fly   441 GEKRFACPVCNKRFMRSDHLAKHVKTHNGT 470
            |:|||.|..|.|||||||||.||.|||.||
Mouse   581 GDKRFECAQCQKRFMRSDHLTKHYKTHLGT 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 C2H2 Zn finger 390..409 CDD:275368 11/18 (61%)
zf-H2C2_2 401..428 CDD:290200 21/26 (81%)
C2H2 Zn finger 417..439 CDD:275368 19/21 (90%)
zf-H2C2_2 431..454 CDD:290200 16/22 (73%)
zf-C2H2 445..467 CDD:278523 15/21 (71%)
C2H2 Zn finger 447..467 CDD:275368 14/19 (74%)
Sp2NP_084496.2 zf-C2H2 525..549 CDD:278523 15/23 (65%)
C2H2 Zn finger 530..549 CDD:275368 11/18 (61%)
zf-H2C2_2 542..568 CDD:290200 21/25 (84%)
C2H2 Zn finger 557..579 CDD:275368 19/21 (90%)
zf-H2C2_2 571..594 CDD:290200 16/22 (73%)
zf-C2H2 585..607 CDD:278523 15/21 (71%)
C2H2 Zn finger 587..607 CDD:275368 14/19 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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