DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp1 and Klf17

DIOPT Version :9

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_083692.2 Gene:Klf17 / 75753 MGIID:2181068 Length:341 Species:Mus musculus


Alignment Length:447 Identity:103/447 - (23%)
Similarity:146/447 - (32%) Gaps:144/447 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 QCNKLSNKSPPPLADAAVGKGFHPWKKSPNSPAAGSSGSSGGGGGGGGSSAGQHSPCA------- 111
            |.||......||:.:..:         .|.|....|||:|           |.|.|.|       
Mouse     3 QDNKEQAMHQPPMDNKML---------VPVSNVPVSSGNS-----------GFHQPPATQYLPEM 47

  Fly   112 -----ISAASSSSSSGSSGGQSSRSLSSSASTMVNITASRPLASSC-AAVGGGS----TGSSSS- 165
                 .||.....:......|..|||........:..|..|..:.| .::|.||    .|||.: 
Mouse    48 MRSYMASAEELRCNEREWESQLIRSLPEHGVRCPSQLAPIPFQNYCQRSIGRGSHVMPVGSSGTL 112

  Fly   166 ------------ASGSQSSSTASAVAAAYGGDLYFPNTSTSNMDNHHMHQGLLGKVEAGAAAFGG 218
                        ..|..||...|.:|.:....:.:|...|.......:..|:|  :..|.|:.| 
Mouse   113 GVTISFSENLMPQGGLPSSRGVSVMAHSSAPAMPYPMPPTVPATTGSLKHGIL--LVPGMASAG- 174

  Fly   219 VYSRHPYDWPFNAVTHKEAASVNSGWWDMHSAAGSWLDMGGAGMHSTMANYASENYSSALSHSLL 283
                          ||               |...::|.                    :.||:.
Mouse   175 --------------TH---------------AVAPFMDQ--------------------MLHSIN 190

  Fly   284 GSGQHLLQDTYKSMLPGQGVGVGVGVGMGGFSLPHSSPSAAAAAAATAAAAAGGSPQGGSPSTPS 348
            .....:|...::.:                  ||..|..:....:.|..     .|....|.||:
Mouse   191 PCNPEMLPARFQQL------------------LPLDSQDSLVTESNTQE-----EPFVREPPTPA 232

  Fly   349 PRSQRRYAGRATCDCPNCQEAERLGPAGVHLRKKNI---HSCHIPGCGKVYGKTSHLKAHLRWHT 410
            |..         .:.|:...       |...|:..:   :.|....|||.|.|.|||.:|.|.||
Mouse   233 PEG---------AESPSTSR-------GATRRQSPVSRPYVCTYNSCGKSYTKRSHLVSHQRKHT 281

  Fly   411 GERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTH 467
            |.:||.|:|..|..:|.|||||.||.|.||..:...|..|::.|||||||.:|.:||
Mouse   282 GVKPFACDWNGCTWKFFRSDELGRHKRIHTRYRPHKCDECDREFMRSDHLRQHKRTH 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 C2H2 Zn finger 390..409 CDD:275368 10/18 (56%)
zf-H2C2_2 401..428 CDD:290200 13/26 (50%)
C2H2 Zn finger 417..439 CDD:275368 12/21 (57%)
zf-H2C2_2 431..454 CDD:290200 9/22 (41%)
zf-C2H2 445..467 CDD:278523 10/21 (48%)
C2H2 Zn finger 447..467 CDD:275368 10/19 (53%)
Klf17NP_083692.2 COG5048 <22..317 CDD:227381 86/396 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..252 9/58 (16%)
zf-C2H2 256..280 CDD:278523 11/23 (48%)
C2H2 Zn finger 261..280 CDD:275368 10/18 (56%)
C2H2 Zn finger 288..310 CDD:275368 12/21 (57%)
zf-H2C2_2 302..325 CDD:290200 9/22 (41%)
zf-C2H2 316..338 CDD:278523 10/21 (48%)
C2H2 Zn finger 318..338 CDD:275368 10/19 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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