DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and sp3a

DIOPT Version :9

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_005167474.1 Gene:sp3a / 558652 ZFINID:ZDB-GENE-070410-111 Length:691 Species:Danio rerio


Alignment Length:714 Identity:185/714 - (25%)
Similarity:245/714 - (34%) Gaps:285/714 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 SPNSP--AAGSSGSSGGGGGGGGSSAGQHSPCAISAASSSSSSGSSGGQSSRSLSSSASTMVNIT 143
            :|..|  |...:.||....|||....||.||.|:.||:.:.....:.|..:.:.|::||..||..
Zfish     3 APEGPVKAGVMADSSSAQDGGGAEQDGQPSPLALLAATCTGLGSPAPGAENGASSNNASAGVNAD 67

  Fly   144 ASRPLASSC---AAV----------GGG-------------------------STGSSSSA---- 166
            .|..|.||.   .||          |.|                         ::|:.:||    
Zfish    68 LSDQLTSSTERWEAVRDDSGVLHLPGTGIVTSNGQYVLPLQSLQGLQNQPILLTSGTDASAGAVP 132

  Fly   167 -------------SGSQSSSTASAVAAAYGGDLYFPN-------TSTSNMDNH--------HMHQ 203
                         .|....|.||....|.|.....|:       ||...:.|.        .:||
Zfish   133 NIQYQVIPQVQTTDGQLGFSGASMAQDATGHIQILPDGTQTISVTSADVLSNSQSLMTQTGQVHQ 197

  Fly   204 GLLGKVEAGAAAFGGVYSRHPYDWPFN-------------------------------------- 230
              :.:|..|::||||..:..|...|.|                                      
Zfish   198 --IPQVSLGSSAFGGQVTNVPLGLPGNITFVPINSVDLDSLGLSGAQPIATGITADGQLIMTNQS 260

  Fly   231 -----------------------------AVTHKEAASVN-SGWWDMHSAAGSWLDMGG------ 259
                                         :|:..:|.::: :|.......||...|..|      
Zfish   261 VENSEKAGEQQQQTLSTNATADMFVPTTSSVSSSQATTIDGTGVLTQQPVAGEQTDSSGYLSQGA 325

  Fly   260 -------------------------AGMHSTMANYASENYSSAL--SHSLLGSGQ---------- 287
                                     |....||.|....|..:.|  :.::..|||          
Zfish   326 VQVSGGQQVIQLQQLPLQSADGQASAQAQQTMQNIQLINPGTFLIQAQTVTPSGQIQWQTFQVQG 390

  Fly   288 -HLLQDTYKSMLPGQGVGVG----VGVGMGGFSLPHSS---PSAAAAAAATAAAAAGGSPQGGSP 344
             ..||:......|.|.:.:.    :.:|.||..:..||   |:..:....|...|  |.....|.
Zfish   391 VQNLQNLQLQTAPTQQITLAPVQTLSLGQGGTPVSLSSGQMPNLQSVTVNTVGQA--GIQFQQSE 453

  Fly   345 STPS---------PRSQR---------------------------------RYAGRATCDCPNCQ 367
            .|.|         |.|:.                                 :...|..|.||||:
Zfish   454 DTDSTGDIQIKEEPDSEEWPLDSSSTLNANDLSHLRVRLVEEEMEALSQEGKRLRRVACTCPNCK 518

  Fly   368 EAERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDEL 432
            |.   |..|.::.||..|.|||.||||||||||||:||||||:|||||||.|:||||||||||||
Zfish   519 EG---GGRGSNMGKKKQHVCHIAGCGKVYGKTSHLRAHLRWHSGERPFVCTWMFCGKRFTRSDEL 580

  Fly   433 QRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTHNGTANHQANGHNGGLKKGSSESCSDSEEAA 497
            |||.|||||||:|.|..|:||||||||||||:|||..             |||            
Zfish   581 QRHRRTHTGEKKFVCSECSKRFMRSDHLAKHIKTHQN-------------KKG------------ 620

  Fly   498 NQSGESNGLGGVGSGPQTGGAGGGGGGSSSG--NGAGTLAVSGSVTTGAGAGSGTGSSNSNSNS 559
                              ||....||.||.|  ...||..:..::..|:..|..|.::..|::|
Zfish   621 ------------------GGVVSSGGVSSDGIITAGGTTLILTNIQPGSMQGLATVNATVNTSS 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 C2H2 Zn finger 390..409 CDD:275368 16/18 (89%)
zf-H2C2_2 401..428 CDD:290200 22/26 (85%)
C2H2 Zn finger 417..439 CDD:275368 18/21 (86%)
zf-H2C2_2 431..454 CDD:290200 16/22 (73%)
zf-C2H2 445..467 CDD:278523 16/21 (76%)
C2H2 Zn finger 447..467 CDD:275368 15/19 (79%)
sp3aXP_005167474.1 Fimbrial 125..230 CDD:294848 23/106 (22%)
zf-C2H2 533..557 CDD:278523 20/23 (87%)
C2H2 Zn finger 535..557 CDD:275368 19/21 (90%)
COG5048 <548..619 CDD:227381 57/83 (69%)
zf-H2C2_2 549..576 CDD:290200 22/26 (85%)
C2H2 Zn finger 565..587 CDD:275368 18/21 (86%)
zf-H2C2_2 579..602 CDD:290200 16/22 (73%)
zf-C2H2 593..615 CDD:278523 16/21 (76%)
C2H2 Zn finger 595..615 CDD:275368 15/19 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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