DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and klf4

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001017280.1 Gene:klf4 / 550034 XenbaseID:XB-GENE-1015049 Length:407 Species:Xenopus tropicalis


Alignment Length:374 Identity:108/374 - (28%)
Similarity:159/374 - (42%) Gaps:39/374 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 ISAASSSSSSGSSGGQSSRSLSSSASTMVNITASRPLASSCAAVGGGSTGSSSSASGSQSSSTAS 176
            :.::|||||..:|......:|..:.|.:.:.|.:......|.....|.|...::...:.||:|.:
 Frog    54 VGSSSSSSSVTASSPPPPATLPDTMSALSSTTCNFVYQVRCPQESSGGTLMYNARDPTMSSATFN 118

  Fly   177 AV----AAAYGGDLYFPNTSTSNMDNHHMHQ----GLLGKVEAGAAAFGGVY--------SRHPY 225
            ..    .:..||  :.......::|...|.|    .|.||.........|.|        :....
 Frog   119 LADINDVSPSGG--FVAELMRPDLDPVFMQQQPQASLQGKFVLKTTVSMGDYGQTISVRKNNSGI 181

  Fly   226 DWPFNAVTHKEAASVNSGWWDMHSAAGSWLDMGGAGMHS-TMANYASENYSSALSHSLLGSGQHL 289
            |.|.:..||:..........:..|:..|...|.|.|..| :|..:.              :|:.|
 Frog   182 DSPLSYTTHQLPRVCQKIKQEPSSSCTSACPMDGQGQQSQSMREFQ--------------AGRGL 232

  Fly   290 LQDTYKSMLPGQGVGVGVGVGMGGFSLPHSSPSAAAAAAATAAAAAGGSPQGGSPSTPSPRSQRR 354
            ...|.:|:.|.:  .:|........:|.|||.....|...:|:.:...|.|   |.|..|.:|.:
 Frog   233 PIRTNQSLSPEE--LMGRDCHSSSQTLSHSSLPIPPAYHTSASFSHFTSDQ---PQTQLPPTQLQ 292

  Fly   355 YAGRATC-DCPNCQEAERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCN 418
            |....|. .|...:...:.|......::...|:|...||||.|.|:||||||||.||||:|:.|:
 Frog   293 YQELLTTGGCIPEESKPKRGRKSWPRKRTATHTCEYAGCGKTYTKSSHLKAHLRTHTGEKPYHCD 357

  Fly   419 WLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTH 467
            |..||.:|.|||||.||.|.|||.:.|.|..|::.|.||||||.|:|.|
 Frog   358 WEGCGWKFARSDELTRHYRKHTGHRPFQCQRCDRAFSRSDHLALHMKRH 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 58/291 (20%)
C2H2 Zn finger 390..409 CDD:275368 14/18 (78%)
zf-H2C2_2 401..428 CDD:463886 17/26 (65%)
C2H2 Zn finger 417..439 CDD:275368 13/21 (62%)
zf-H2C2_2 431..454 CDD:463886 11/22 (50%)
zf-C2H2 445..467 CDD:395048 12/21 (57%)
C2H2 Zn finger 447..467 CDD:275368 11/19 (58%)
klf4NP_001017280.1 KLF4_N 1..324 CDD:409228 58/290 (20%)
zf-C2H2 324..348 CDD:395048 16/23 (70%)
C2H2 Zn finger 326..348 CDD:275368 15/21 (71%)
zf-H2C2_2 340..367 CDD:463886 17/26 (65%)
C2H2 Zn finger 356..378 CDD:275368 13/21 (62%)
zf-H2C2_2 370..395 CDD:463886 12/24 (50%)
C2H2 Zn finger 386..406 CDD:275368 11/19 (58%)

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