DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp1 and Klf13

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_067341.2 Gene:Klf13 / 50794 MGIID:1354948 Length:289 Species:Mus musculus


Alignment Length:264 Identity:95/264 - (35%)
Similarity:114/264 - (43%) Gaps:90/264 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 PHSSPSAAAAAAATAA--AAAGGSPQGGSPSTPSPRS-------QRRYAGRATCDCPNCQEAERL 372
            |...|::...|.|.||  :.|...|:......|.|..       ||...||:..|..:.|     
Mouse   106 PGPEPASPGQAGAPAAPPSPAWSEPEAALEQEPGPAGSGEPGLRQRGRRGRSRADLESPQ----- 165

  Fly   373 GPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLR 437
                   ||   |.||..||.|||||:||||||||.|||||||.|:|..|.|:|.|||||.||.|
Mouse   166 -------RK---HKCHYAGCEKVYGKSSHLKAHLRTHTGERPFACSWQECNKKFARSDELARHYR 220

  Fly   438 THTGEKRFACPVCNKRFMRSDHLAKHVKTHNGTANHQANGHNGGLKKGSSESCSDSEEAANQSGE 502
            ||||||:|:||:|.|||||||||.||.:.|       ||.|.|.|::                  
Mouse   221 THTGEKKFSCPICEKRFMRSDHLTKHARRH-------ANFHPGMLQR------------------ 260

  Fly   503 SNGLGGVGSGPQTGGAGGGGGGSSSGNGAGTLAVSGSVTTGAGAGSGTGSSNSNSNSGGSSGSVS 567
                                                     .|.||.|||.:..|.|..||.::|
Mouse   261 -----------------------------------------RGGGSRTGSLSDYSRSDASSPTIS 284

  Fly   568 GSVS 571
            .:.|
Mouse   285 PASS 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 18/77 (23%)
C2H2 Zn finger 390..409 CDD:275368 15/18 (83%)
zf-H2C2_2 401..428 CDD:463886 19/26 (73%)
C2H2 Zn finger 417..439 CDD:275368 13/21 (62%)
zf-H2C2_2 431..454 CDD:463886 16/22 (73%)
zf-C2H2 445..467 CDD:395048 15/21 (71%)
C2H2 Zn finger 447..467 CDD:275368 14/19 (74%)
Klf13NP_067341.2 KLF13_N 7..169 CDD:409236 18/77 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..54
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..168 18/76 (24%)
COG5048 <163..253 CDD:227381 64/111 (58%)
C2H2 Zn finger 170..192 CDD:275368 17/21 (81%)
C2H2 Zn finger 200..222 CDD:275368 13/21 (62%)
C2H2 Zn finger 230..250 CDD:275368 14/19 (74%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 250..289 18/105 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.