DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and Zfp352

DIOPT Version :9

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001102827.1 Gene:Zfp352 / 502968 RGDID:1563227 Length:559 Species:Rattus norvegicus


Alignment Length:582 Identity:125/582 - (21%)
Similarity:197/582 - (33%) Gaps:197/582 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 TPLAMLAAQCNKLSNKSPPPLADAAVGKG----FHPWKKSPNSPA-------AGSSGSSGGGGGG 99
            ||.|.....|    |..|.|:..:.:..|    ...||::..:.:       |.:..|:...|..
  Rat     6 TPGASQTVPC----NTQPSPVESSQLVSGQSSEMPTWKQTGMASSYFNPYETACTQNSTAHRGKA 66

  Fly   100 GGSSAGQHSPCA------ISAASSSSSSGS------------------------SGGQSSRSLSS 134
            ..|..|:.|..|      :||..:.|..||                        :.|...|:|:|
  Rat    67 TDSYFGEPSETASFIQQVVSAEQNKSPEGSLFMKLNSTATSCLPQPLDTRKTLYNEGYWRRTLNS 131

  Fly   135 SASTMVNITASRPLASSCAAVGGGSTGSSSSASGSQSSST---ASAVAAAYGGDLYFPNTSTSNM 196
            ..:.::..|   .|..|.....|....:.|.:...|..:.   .|.....:||||..|.:.    
  Rat   132 DKTLLIQNT---DLCESQRITFGNHPVALSGSHAGQVPNVDHLDSVWDQTFGGDLEMPFSD---- 189

  Fly   197 DNHH-----MHQGLLGKVEAGAAA------------FGGVYSRHPY-DWPFNAVTHKEAASVNSG 243
            |:::     .:.|.|...|:...|            ....|.::|: |...:.||.      |..
  Rat   190 DSYYSQMTTKYGGHLTLYESQMIAPSCNQVLDTDQFVTSFYEQNPFGDQQRSPVTE------NKF 248

  Fly   244 WWDMHSAAGSWL---------DMGGAGMHSTMANYASENYSSAL------SHSLLG---SGQHLL 290
            :.|......::.         :.......|.||:::.:|..|..      .|||.|   ||....
  Rat   249 YGDQMIVPNAYQAFYEPQVRDNSDQINFDSRMASFSGQNICSGQESIFQDEHSLSGFQTSGYRCD 313

  Fly   291 QD---TYKSMLPGQGVGVGVGVGMGGFSL-------------PHSSPSAAAAAAATAAAAAGGSP 339
            ||   .::.:.|           :||.:|             ||.|....::|....|       
  Rat   314 QDWIMNHQVISP-----------IGGQTLYDSQKPTSTFNTTPHGSKRTTSSAEDNLA------- 360

  Fly   340 QGGSPSTPSPRSQRRYAG--RATCD---------CPNCQE------------AERLGPAG----- 376
              ..|.|.|...:..|.|  ||:.|         ..|.:|            |..:|.:.     
  Rat   361 --WHPETSSSSEETLYMGQMRASVDQNVYASQNGTANTEESLEPEVTSLSNQAPDVGESSDSSSS 423

  Fly   377 --VHLRKKNI----------------------------------HSCHIPGCGKVYGKTSHLKAH 405
              :.::.:.|                                  :||...||.|.|.|:.|||.|
  Rat   424 PLIRIQSQGISSASGLDQGQHPQIRLDLKTQSPVSPEKPPTLKRYSCTYQGCEKSYTKSHHLKDH 488

  Fly   406 LRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTH 467
            :|.||||:||||:.:.|..:|.||.:|.||.:.|:||:.:|||.|||.:.|..:|.:|..:|
  Rat   489 MRKHTGEKPFVCDQIGCNWKFFRSIDLNRHKKKHSGERPYACPKCNKNYSRPYYLKQHQVSH 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 C2H2 Zn finger 390..409 CDD:275368 10/18 (56%)
zf-H2C2_2 401..428 CDD:290200 15/26 (58%)
C2H2 Zn finger 417..439 CDD:275368 8/21 (38%)
zf-H2C2_2 431..454 CDD:290200 12/22 (55%)
zf-C2H2 445..467 CDD:278523 9/21 (43%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
Zfp352NP_001102827.1 zf-C2H2 468..492 CDD:278523 12/23 (52%)
C2H2 Zn finger 470..492 CDD:275368 11/21 (52%)
zf-H2C2_2 484..>502 CDD:290200 13/17 (76%)
C2H2 Zn finger 500..522 CDD:275368 8/21 (38%)
zf-H2C2_2 514..539 CDD:290200 12/24 (50%)
C2H2 Zn finger 530..550 CDD:275368 8/19 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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