DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp1 and sp7

DIOPT Version :9

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_998028.1 Gene:sp7 / 405789 ZFINID:ZDB-GENE-040629-2 Length:440 Species:Danio rerio


Alignment Length:545 Identity:190/545 - (34%)
Similarity:238/545 - (43%) Gaps:168/545 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 TPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSPNSPAAGSSGSSGGGGGGGGSSAGQHSPC 110
            :|||||.|.|||..:.|  |:.|:|          :|..|                   |...|.
Zfish    15 SPLAMLTATCNKFGSTS--PVRDSA----------TPGKP-------------------GSTIPI 48

  Fly   111 AISAASSSSSSGSSGGQSSRSLSSSASTMVNITASRPLASSCAAVGGGSTGSSSSASG--SQSSS 173
            ..:.:.:|....:..|::.                        :|....|||.||:.|  :.:.|
Zfish    49 KKAYSMTSELQSAKNGRNE------------------------SVADSYTGSFSSSGGLLTPTGS 89

  Fly   174 TASAVAAAYGGDLYFP----NTSTSNMDNHHMHQGLLG-KVEAGAAAFGGVY--SRHPYDWPFNA 231
            ...|...|||.: |.|    .||:.:.|     ..||| |..|........|  ..|||...:..
Zfish    90 PPPAPTGAYGSE-YNPFSTFQTSSVSQD-----PSLLGSKATADCLTSVNTYLDMTHPYGSWYKG 148

  Fly   232 VTH----KEAASVNSGWWDMHSAAGSWLDMGGAGMHSTM-------------------------- 266
            : |    ...|:..|.|||:|:.| :||..|.|...|..                          
Zfish   149 I-HPGITASPANATSSWWDVHTNA-NWLSPGQAQPDSLQAPLQPVAPQASLNPQMPSYTPDFTPL 211

  Fly   267 --ANYASENYSSALSHSLLGSGQHLL-QDTYKSMLPGQGVGVGVGVGMGGFSLPHSSPSAAAAAA 328
              |.|.|...||: || ||.|.||:| ||.||                     |...|::.....
Zfish   212 NPAPYPSVGLSSS-SH-LLQSSQHMLPQDMYK---------------------PKPVPTSGILDN 253

  Fly   329 ATAAAAAGGSPQGGSPSTPSPRSQRRYAGRATCDCPNCQEAERLGPAGVHLRKKNIHSCHIPGCG 393
            :....:|.||......:|          ||::||||||||.||||.:...||||.:|||||||||
Zfish   254 SMGLKSARGSGYAAGSTT----------GRSSCDCPNCQELERLGASAASLRKKPVHSCHIPGCG 308

  Fly   394 KVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSD 458
            |||||.|||||||||||||||||||||||||||||||||:||:||||.||:|.|.:|||||.|||
Zfish   309 KVYGKASHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELERHVRTHTREKKFTCLLCNKRFTRSD 373

  Fly   459 HLAKHVKTHNGTANHQANGHNGGLKKGSSESCSDSEEAANQSGESNGLGGVGSGPQTG---GAGG 520
            ||:||.|||                  |..|....||...::.||:......:|.:.|   .|.|
Zfish   374 HLSKHQKTH------------------SEASLQGKEEPETRAEESSADKVAPAGSEIGIQEPAVG 420

  Fly   521 GGGGSSSGNGAGTLAVSGSVTTGAG 545
            |...||:|||         |.:|:|
Zfish   421 GEEKSSTGNG---------VDSGSG 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 C2H2 Zn finger 390..409 CDD:275368 17/18 (94%)
zf-H2C2_2 401..428 CDD:290200 26/26 (100%)
C2H2 Zn finger 417..439 CDD:275368 19/21 (90%)
zf-H2C2_2 431..454 CDD:290200 15/22 (68%)
zf-C2H2 445..467 CDD:278523 15/21 (71%)
C2H2 Zn finger 447..467 CDD:275368 14/19 (74%)
sp7NP_998028.1 zf-C2H2 300..324 CDD:278523 22/23 (96%)
zf-C2H2_8 302..386 CDD:292531 71/101 (70%)
C2H2 Zn finger 305..324 CDD:275368 17/18 (94%)
zf-H2C2_2 316..343 CDD:290200 26/26 (100%)
C2H2 Zn finger 332..354 CDD:275368 19/21 (90%)
zf-H2C2_2 346..371 CDD:290200 17/24 (71%)
C2H2 Zn finger 362..382 CDD:275368 14/19 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 132 1.000 Domainoid score I5066
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D295820at33208
OrthoFinder 1 1.000 - - FOG0001688
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.980

Return to query results.
Submit another query.