DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and hkb

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster


Alignment Length:329 Identity:99/329 - (30%)
Similarity:129/329 - (39%) Gaps:97/329 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 ITASRPLASSCAAVGGGSTGSSSSASGSQSSSTASAVAAAYGGDL---YFPNTSTSNMDNHHMHQ 203
            ||....||||  :.|....|..||||.|.|||:.|: .:.|...|   .:..|||..:|      
  Fly    41 ITIKTELASS--SFGHDCDGDFSSASSSASSSSNSS-KSCYEEALNHSSYTRTSTPLLD------ 96

  Fly   204 GLLGKVEAGAAAFGGVYSRHPYDWPFNAVTHKEAASVNSGWWDMHSAAGSWLDMGGAGMHSTMAN 268
                      ||...|:| ||...|.                |.|:||.:  .:.....|:...:
  Fly    97 ----------AAPHPVFS-HPQSSPL----------------DTHAAATA--SLAPPNQHAPFLS 132

  Fly   269 YASENYSSALSHSLLGSGQHLLQDTYKSMLPGQGVGVGVGVGMGGFSLPHSSPSAAAAAAATAAA 333
            .||:.|                                           :::.:||||||:|..|
  Fly   133 AASDLY-------------------------------------------YAAAAAAAAAASTPTA 154

  Fly   334 AAGGSPQGGSPSTPSPRSQRRYAGRATCDCPNCQEAERLGPAGVHLRKKNIHSCHIPGCGKVYGK 398
            ..|   .|..|.|.....| .|| |..        ||......::.||:.......|.|...:..
  Fly   155 VPG---FGMDPFTMGLMEQ-EYA-RVM--------AEDAQLKALNSRKQRPKKFKCPNCDVAFSN 206

  Fly   399 TSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKH 463
            ...||.|:|.|||||||.|:...|||.|||::||.||.|.|||.:.:.|..|.|:|.|.|||.||
  Fly   207 NGQLKGHIRIHTGERPFKCDVNTCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKH 271

  Fly   464 VKTH 467
            :|||
  Fly   272 MKTH 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 58/246 (24%)
C2H2 Zn finger 390..409 CDD:275368 6/18 (33%)
zf-H2C2_2 401..428 CDD:463886 16/26 (62%)
C2H2 Zn finger 417..439 CDD:275368 12/21 (57%)
zf-H2C2_2 431..454 CDD:463886 11/22 (50%)
zf-C2H2 445..467 CDD:395048 11/21 (52%)
C2H2 Zn finger 447..467 CDD:275368 11/19 (58%)
hkbNP_524221.1 COG5048 195..>261 CDD:227381 30/65 (46%)
C2H2 Zn finger 197..217 CDD:275368 6/19 (32%)
C2H2 Zn finger 225..247 CDD:275368 12/21 (57%)
zf-C2H2 253..275 CDD:395048 11/21 (52%)
C2H2 Zn finger 255..275 CDD:275368 11/19 (58%)

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