DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp1 and SP5

DIOPT Version :9

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_011509461.1 Gene:SP5 / 389058 HGNCID:14529 Length:454 Species:Homo sapiens


Alignment Length:507 Identity:169/507 - (33%)
Similarity:202/507 - (39%) Gaps:191/507 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PQVNPD---HPSLRGTPLAMLAAQCNKLSN---KSPPPLA----DAAVG---KGFHPWKKSPNSP 85
            |..:||   |     :|||:|||.|:::..   .:||...    |.|:|   :.||||  :.:.|
Human    77 PSASPDLGKH-----SPLALLAATCSRIGQPGAAAPPDFLQVPYDPALGSPSRLFHPW--TADMP 134

  Fly    86 AAGSSGSSGGGGGGGGSSAGQHSPCAISAASSSSS--------SGSSGGQSSRSLSSSA--STMV 140
            |                    |||.|:.....|..        ..|.|......|:..|  |...
Human   135 A--------------------HSPGALPPPHPSLGLTPQKTHLQPSFGAAHELPLTPPADPSYPY 179

  Fly   141 NITASRPLASSCAAVGGGSTGSSSSASGSQSSSTASAVAAAYGGDL--------------YFPNT 191
            ..:..:.|.||.||:      .:|.|......:..:|:...|...|              ..||.
Human   180 EFSPVKMLPSSMAAL------PASCAPAYVPYAAQAALPPGYSNLLPPPPPPPPPPTCRQLSPNP 238

  Fly   192 STSNMDNHHMHQGLLGKVEAGAAAFGGVYSRHPYDWPFNAVTHKEAASVNSGWWDMHSAAGSWLD 256
            :                               |.|.|               ||.:..|      
Human   239 A-------------------------------PDDLP---------------WWSIPQA------ 251

  Fly   257 MGGAGMHSTMANYASENYSSALSHSLLGSGQHLLQDTYKSMLPGQGVGVGVGVGMGGFSLPHSS- 320
              |||..:                               |.:||.|:. |...|     .||:. 
Human   252 --GAGPGA-------------------------------SGVPGSGLS-GACAG-----APHAPR 277

  Fly   321 -PSAAAAAAATAAAAAGGSPQGGS-----------------PSTPSPRSQRRYAGRATCDCPNCQ 367
             |::||||||.|||...|...|.|                 |...:.|..||      |.|||||
Human   278 FPASAAAAAAAAAALQRGLVLGPSDFAQYQSQIAALLQTKAPLAATARRCRR------CRCPNCQ 336

  Fly   368 EAERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDEL 432
            .|.  |.......||..|.||:|||||||||||||||||||||||||||||||||||.|||||||
Human   337 AAG--GAPEAEPGKKKQHVCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFTRSDEL 399

  Fly   433 QRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTHNGTANHQANGHNGGLKK 484
            ||||||||||||||||.|.||||||||||||||||.   |.:......|:|:
Human   400 QRHLRTHTGEKRFACPECGKRFMRSDHLAKHVKTHQ---NKKLKVAEAGVKR 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 C2H2 Zn finger 390..409 CDD:275368 18/18 (100%)
zf-H2C2_2 401..428 CDD:290200 25/26 (96%)
C2H2 Zn finger 417..439 CDD:275368 20/21 (95%)
zf-H2C2_2 431..454 CDD:290200 20/22 (91%)
zf-C2H2 445..467 CDD:278523 19/21 (90%)
C2H2 Zn finger 447..467 CDD:275368 17/19 (89%)
SP5XP_011509461.1 C2H2 Zn finger 357..376 CDD:275368 18/18 (100%)
COG5048 <367..440 CDD:227381 66/75 (88%)
zf-H2C2_2 368..395 CDD:290200 25/26 (96%)
C2H2 Zn finger 384..406 CDD:275368 20/21 (95%)
zf-H2C2_2 398..421 CDD:290200 20/22 (91%)
zf-C2H2 412..434 CDD:278523 19/21 (90%)
C2H2 Zn finger 414..434 CDD:275368 17/19 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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