DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and CG3065

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster


Alignment Length:333 Identity:96/333 - (28%)
Similarity:118/333 - (35%) Gaps:123/333 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 PRSQRRYAGRATCDCPNCQEAERLGPAGVHLRKKNIHS-------CHIPGCGKVYGKTSHLKAHL 406
            |.....|.|       |.....|:.|: |.|....:.|       |....|.|.|||:|||::||
  Fly    74 PEDDSHYGG-------NGNSKIRIMPS-VKLMATTLASDPKRKFVCPYDNCTKSYGKSSHLRSHL 130

  Fly   407 RWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTHNGTA 471
            .||||.:||||:...|||.|||||||.||||||||||.|.|..|.|:|.|||||.||:.||:...
  Fly   131 TWHTGIKPFVCSEPKCGKGFTRSDELNRHLRTHTGEKPFECIQCTKKFSRSDHLTKHLATHDRQL 195

  Fly   472 NHQANGHNGGLKKGSSESCSDSEEAANQSGESNGLGGVGSGPQTGGAGGGGGGSSSGNGAGTLAV 536
                        |||                                                  
  Fly   196 ------------KGS-------------------------------------------------- 198

  Fly   537 SGSVTTGAGAGSGTGSSNSNSNSGGSSGSVSGSVSGSGSHPGTPTSLHAHSANGTSSSLLGGGLH 601
                         |......|:|||....              |.....||.:.:       |.|
  Fly   199 -------------TPKRTVPSSSGGVRLK--------------PPKKQIHSESDS-------GFH 229

  Fly   602 LATPHQMVAAGGSPVMLHQQQQQQQHQQQQQQQQQQQHQQQ-----QQQQHQQQQQ----QHQQQ 657
            ...  .||.. |.|.|.|..||||.:|.||.......|.:.     ::.:|..:.|    :||..
  Fly   230 FMA--AMVGC-GEPSMKHHHQQQQHNQHQQPVSIIDIHHKPIKIKLERPEHSDKYQIVSPEHQMD 291

  Fly   658 QQQHHQQQ 665
            ...|:|.|
  Fly   292 NHGHNQSQ 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 8/36 (22%)
C2H2 Zn finger 390..409 CDD:275368 10/18 (56%)
zf-H2C2_2 401..428 CDD:463886 16/26 (62%)
C2H2 Zn finger 417..439 CDD:275368 15/21 (71%)
zf-H2C2_2 431..454 CDD:463886 16/22 (73%)
zf-C2H2 445..467 CDD:395048 12/21 (57%)
C2H2 Zn finger 447..467 CDD:275368 11/19 (58%)
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 88/300 (29%)
C2H2 Zn finger 111..133 CDD:275368 11/21 (52%)
C2H2 Zn finger 141..163 CDD:275368 15/21 (71%)
C2H2 Zn finger 171..191 CDD:275368 11/19 (58%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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