DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and CG42741

DIOPT Version :9

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster


Alignment Length:395 Identity:126/395 - (31%)
Similarity:168/395 - (42%) Gaps:88/395 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 QHSPCAISAASSSSSSGSSGGQSSRSLSSSASTMVNITASRPLASSCAAVGGGSTGSSSSA---S 167
            |..|..:|..|..:|: |.|..||....|||:..|..:..:|         |||:|||||:   :
  Fly    23 QVEPVDLSLRSPRAST-SHGSSSSSYKFSSANKAVGYSNGKP---------GGSSGSSSSSGFGA 77

  Fly   168 GSQSSSTASAVAAAYGGDLYFPNTSTSNMDNHHMHQGLLGKVEAGAAAFGGVYSRHPYDWPFNAV 232
            ||..||:..|.||.....||                           |..|| |:.|:. ||.|.
  Fly    78 GSAGSSSLGAFAAQQQQQLY---------------------------ASSGV-SKLPFS-PFFAA 113

  Fly   233 -----THKEAASVNSGWWDMHSAAGSWLDMGGAGMHSTMA--NYASENYSSALSHSLLGSGQHLL 290
                 |::..:...||              .|.|..|...  |..|.:|::..|....||..:.:
  Fly   114 SPFFFTYRRISGSGSG--------------NGTGSVSVKQEDNNNSCSYNNGSSSGGAGSAANSM 164

  Fly   291 QDTYKSMLP-------------GQGVGVGVGVGMGGFSLP---HSSPSAAAAAAATAAAAA---- 335
            || |:|...             |.|.........||.|.|   :||||..:.|.:.:..||    
  Fly   165 QD-YESKFSLLSLFKNPYKFAGGDGQASRKTSPTGGSSKPLASNSSPSWKSYAGSGSPHAALNPA 228

  Fly   336 -GGSPQGGSPSTPSPRSQRRYAGRATCDCPNCQEAERLGPAGVHLRKKN--IHSCHIPGCGKVYG 397
             ||..:|.:....|..|...:.|..:. ......::.:...|.:...||  :|.|...||.|||.
  Fly   229 FGGMGRGATRKDNSSFSGINFGGGGSA-FGFTTSSDSMANGGYNDLSKNRKVHKCDTEGCDKVYT 292

  Fly   398 KTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAK 462
            |:||||||.|.||||:|:||.|..|..||.|||||.||.|.|||.|.|.|.:|.:.|.|||||:.
  Fly   293 KSSHLKAHKRTHTGEKPYVCTWEGCIWRFARSDELTRHYRKHTGVKPFRCQLCTRSFSRSDHLSL 357

  Fly   463 HVKTH 467
            |::.|
  Fly   358 HMRRH 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 C2H2 Zn finger 390..409 CDD:275368 13/18 (72%)
zf-H2C2_2 401..428 CDD:290200 17/26 (65%)
C2H2 Zn finger 417..439 CDD:275368 13/21 (62%)
zf-H2C2_2 431..454 CDD:290200 12/22 (55%)
zf-C2H2 445..467 CDD:278523 10/21 (48%)
C2H2 Zn finger 447..467 CDD:275368 9/19 (47%)
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 44/78 (56%)
zf-C2H2 280..304 CDD:278523 15/23 (65%)
C2H2 Zn finger 282..304 CDD:275368 14/21 (67%)
zf-H2C2_2 296..>313 CDD:290200 12/16 (75%)
C2H2 Zn finger 312..334 CDD:275368 13/21 (62%)
zf-H2C2_2 326..351 CDD:290200 13/24 (54%)
C2H2 Zn finger 342..362 CDD:275368 9/19 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455423
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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