DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp1 and sp5a

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_851304.2 Gene:sp5a / 353154 ZFINID:ZDB-GENE-030430-2 Length:368 Species:Danio rerio


Alignment Length:464 Identity:148/464 - (31%)
Similarity:190/464 - (40%) Gaps:148/464 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PQVNPDHPSLRGTPLAMLAAQCNKLSN---KSPPPLA----DAAVG---KGFHPWKKSPNSPAAG 88
            |..:|::.  :.:|||:|||.||::.:   .:|....    |..:|   :.||||....|..:..
Zfish    21 PNSSPENS--KHSPLALLAATCNRIGHHHGSTPTDFIQVPYDTTLGSPSRIFHPWSNEANHQSTL 83

  Fly    89 SSGSSGGGGGGGGSSAGQHSPCAISAASSSSSSGSSGGQSSRSLSSSASTMVNITASRPLASSCA 153
            ||..|.|                :|:.|...||.:|..:...:..:..:...:.:..:.|..|..
Zfish    84 SSNPSFG----------------LSSKSHLQSSYASHHELPLTPPADPTYPYDFSPVKMLPCSMQ 132

  Fly   154 AVGGGSTGSSSSASGSQSSSTASAV-AAAYGGDLYFPNTSTSNMDNHH--MHQGLLGKVEAGAAA 215
            ::              ||:...:.| |..|......|....|.:..|.  :||            
Zfish   133 SL--------------QSTCPPTYVPAVTYAAPAPIPPAMPSFVPGHSGLVHQ------------ 171

  Fly   216 FGGVYSRHPYDWPFNAVTHKEAASVNSG----WWDMHSAAGSWLDMGGAGMHSTMANYASENYSS 276
                              .:...|.|.|    ||.        |..|....||...:........
Zfish   172 ------------------QQRQLSPNPGEDIPWWS--------LQQGNPVAHSVHPHRFPIQRGL 210

  Fly   277 ALSHSLLGSGQHLLQDTYKSMLPGQGVGVGVGVGMGGFSLPHS-SPSAAAAAAATAAAAAGGSPQ 340
            .|.|:....        |::.:.               :|.|: ||.|.|               
Zfish   211 VLGHTDFAQ--------YQTQIA---------------ALLHTKSPLATA--------------- 237

  Fly   341 GGSPSTPSPRSQRRYAGRATCDCPNCQEAERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAH 405
                     |..||      |.|||||.:......|    ||..|.|||||||||||||||||||
Zfish   238 ---------RRCRR------CRCPNCQSSSSSDEPG----KKKQHICHIPGCGKVYGKTSHLKAH 283

  Fly   406 LRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTHNGT 470
            ||||:||||||||||||||.||||||||||||||||||||.||.|.||||||||||||||||.  
Zfish   284 LRWHSGERPFVCNWLFCGKSFTRSDELQRHLRTHTGEKRFVCPDCCKRFMRSDHLAKHVKTHQ-- 346

  Fly   471 ANHQANGHN 479
             |.::..|:
Zfish   347 -NKKSKSHD 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 64/353 (18%)
C2H2 Zn finger 390..409 CDD:275368 18/18 (100%)
zf-H2C2_2 401..428 CDD:463886 24/26 (92%)
C2H2 Zn finger 417..439 CDD:275368 20/21 (95%)
zf-H2C2_2 431..454 CDD:463886 19/22 (86%)
zf-C2H2 445..467 CDD:395048 18/21 (86%)
C2H2 Zn finger 447..467 CDD:275368 17/19 (89%)
sp5aNP_851304.2 SP1-4_N 23..>44 CDD:425404 9/22 (41%)
SP5_N 102..264 CDD:412096 43/270 (16%)
C2H2 Zn finger 268..287 CDD:275368 18/18 (100%)
zf-C2H2 293..317 CDD:395048 22/23 (96%)
C2H2 Zn finger 295..317 CDD:275368 20/21 (95%)
zf-H2C2_2 309..332 CDD:463886 19/22 (86%)
C2H2 Zn finger 325..345 CDD:275368 17/19 (89%)

Return to query results.
Submit another query.