DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and sp5l

DIOPT Version :9

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_919352.1 Gene:sp5l / 324261 ZFINID:ZDB-GENE-030131-2981 Length:357 Species:Danio rerio


Alignment Length:384 Identity:142/384 - (36%)
Similarity:177/384 - (46%) Gaps:82/384 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 SSSGSSGGQSSRSLSSSASTMVNITASRPL------ASSCAAVGGGSTGSSSSASGSQSSSTASA 177
            |||..||..:...|:::.|......:..|.      |||...:.......:||.|..|.:.|.. 
Zfish    23 SSSPESGPNTLSFLATTCSQAWQEGSQLPYEGPVGSASSMFQLWSNDVAPNSSLSAHQMTFTVP- 86

  Fly   178 VAAAYGGDLYFPN----TSTSNMDNHHMHQGLLGKVEAGAAAFGGVYSRHPYDWPFNAVTHKEAA 238
                   .:.||:    |..|:..:||.|.                  .|.::.|........:|
Zfish    87 -------KMQFPSHMQPTLGSHSHHHHHHH------------------HHHHELPLTPPAEPPSA 126

  Fly   239 SVNSGWWDMHSAAGSWLDMGGAGMHSTMANYASENYSSALSHSLLGSGQHLLQDTYKSMLPGQGV 303
                     :|...|.:.|.|...:.|..|..|:|:.|.|.:.   ||        ::.|||.  
Zfish   127 ---------YSFELSPVKMQGNAPYYTQHNAVSQNFPSFLQNP---SG--------RAHLPGG-- 169

  Fly   304 GVGVGVGMGGFSLP--HSSPSA---------AAAAAATAAAAAGGSPQGGSPSTPSPRSQRRYAG 357
              .|..|...:|||  :|:||.         ........||...|:.:|...||   |..||   
Zfish   170 --HVEDGQQWWSLPQGNSAPSGHPFSLGRQLVLGHQPQIAALLQGTSKGLLSST---RRCRR--- 226

  Fly   358 RATCDCPNCQEAERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFC 422
               |.|||||.... |.|.:...||.:|.||||.|||||.||||||||||||.|||||:||||||
Zfish   227 ---CKCPNCQSTGN-GGAALEFGKKRLHICHIPDCGKVYKKTSHLKAHLRWHAGERPFICNWLFC 287

  Fly   423 GKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTHNGTANHQAN-GHNG 480
            ||.||||||||||||||||||||.|..|.|||||||||:||||||....:..:. .|:|
Zfish   288 GKSFTRSDELQRHLRTHTGEKRFGCQQCGKRFMRSDHLSKHVKTHQSRKSRSSQPPHSG 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 C2H2 Zn finger 390..409 CDD:275368 16/18 (89%)
zf-H2C2_2 401..428 CDD:290200 23/26 (88%)
C2H2 Zn finger 417..439 CDD:275368 20/21 (95%)
zf-H2C2_2 431..454 CDD:290200 18/22 (82%)
zf-C2H2 445..467 CDD:278523 16/21 (76%)
C2H2 Zn finger 447..467 CDD:275368 15/19 (79%)
sp5lNP_919352.1 C2H2 Zn finger 255..274 CDD:275368 16/18 (89%)
zf-C2H2 280..304 CDD:278523 21/23 (91%)
C2H2 Zn finger 282..304 CDD:275368 20/21 (95%)
zf-H2C2_2 296..319 CDD:290200 18/22 (82%)
C2H2 Zn finger 312..332 CDD:275368 15/19 (79%)
zf-C2H2 312..332 CDD:278523 15/19 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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