DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp1 and Sp8

DIOPT Version :9

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001366308.1 Gene:Sp8 / 320145 MGIID:2443471 Length:504 Species:Mus musculus


Alignment Length:554 Identity:248/554 - (44%)
Similarity:296/554 - (53%) Gaps:144/554 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 DHPSLRGTPLAMLAAQCNKLSNKSPPP--LAD--AAVGKGFHPWKKSPNSPA-----AGSS---- 90
            :.|.|..||||||||.|||:.:.||.|  |:|  ::.||||||||:|.:|.:     .|||    
Mouse     8 EEPRLGSTPLAMLAATCNKIGSPSPSPSSLSDSSSSFGKGFHPWKRSSSSSSGSCNVVGSSLSSF 72

  Fly    91 GSSGGGGGGGGSSAGQHSPCAISAA----SSSSSSGSSGGQSSRSLSSS-----ASTMVNITASR 146
            |.||....||.|||...:..|.:||    |.|.|.|.|.|.|:.||:||     |:......:|.
Mouse    73 GVSGASRNGGSSSAAAAAAAAAAAAAALVSDSFSCGGSPGSSAFSLTSSSAAAAAAAAAAAASSS 137

  Fly   147 PLAS----------SCAAVGGGSTGSSSSASGSQSSSTASAVAAAYGGDLYFPNTSTSNMDNHHM 201
            |.|:          |..:.|||..|...|.:.||.||                            
Mouse   138 PFANDYSVFQAPGVSGGSGGGGGGGGGGSGAHSQDSS---------------------------- 174

  Fly   202 HQGL-LGKVEAGAAAFGGVYSR----HPYDWPFNAVTHK---EAASVN----SGWWDMHSAAGSW 254
            ||.: :.||........|:|.|    |||:..|.. :|.   .||.|.    |.|||:  .|| |
Mouse   175 HQPVFISKVHTSVDGLQGIYPRVGMAHPYESWFKP-SHPGLGAAADVGSAGASSWWDV--GAG-W 235

  Fly   255 LDM-----------------GG--AGMHSTMANYASENY---------SSALSHSLLGSGQHLLQ 291
            :|:                 ||  ..:||.:..|.|: |         |.|.||.|..:||||: 
Mouse   236 IDVQNPNGAAALPGSLHPAAGGLQTSLHSPLGGYNSD-YSGLSHSAFSSGASSHLLSPAGQHLM- 298

  Fly   292 DTYKSMLPGQGVGVGVGVGMGGFSLPHSSPSAAAAAAATAAAAAGGSPQGGSPSTPSPRSQRRYA 356
            |.:|.:|||              |.|.|:||..|.|.::..:|...:..||||.:    |.|||:
Mouse   299 DGFKPVLPG--------------SYPDSAPSPLAGAGSSMLSAGPAAQLGGSPRS----SARRYS 345

  Fly   357 GRATCDCPNCQEAERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLF 421
            ||||||||||||||||||||..||:|.:|||||||||||||||||||||||||||||||||||||
Mouse   346 GRATCDCPNCQEAERLGPAGASLRRKGLHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLF 410

  Fly   422 CGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTHNGTANHQANGHNGGLKKGS 486
            |||||||||||||||||||||||||||||||||||||||:||||||:|..   .:..:||.||||
Mouse   411 CGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTHSGGG---GSAGSGGGKKGS 472

  Fly   487 SESCSDSEEAANQS--------------GESNGL 506
            .   :|||.:|..|              |..|||
Mouse   473 D---TDSEHSAAGSPPCHSPELLQPPEPGHRNGL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 C2H2 Zn finger 390..409 CDD:275368 18/18 (100%)
zf-H2C2_2 401..428 CDD:290200 26/26 (100%)
C2H2 Zn finger 417..439 CDD:275368 21/21 (100%)
zf-H2C2_2 431..454 CDD:290200 22/22 (100%)
zf-C2H2 445..467 CDD:278523 20/21 (95%)
C2H2 Zn finger 447..467 CDD:275368 18/19 (95%)
Sp8NP_001366308.1 SP6-9_N 19..375 CDD:425402 144/407 (35%)
C2H2 Zn finger 379..398 CDD:275368 18/18 (100%)
zf-H2C2_2 390..417 CDD:404364 26/26 (100%)
C2H2 Zn finger 406..428 CDD:275368 21/21 (100%)
zf-H2C2_2 420..443 CDD:404364 22/22 (100%)
zf-C2H2 434..456 CDD:395048 20/21 (95%)
C2H2 Zn finger 436..456 CDD:275368 18/19 (95%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 161 1.000 Domainoid score I3998
eggNOG 1 0.900 - - E33208_3BAZW
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 361 1.000 Inparanoid score I2183
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D295820at33208
OrthoFinder 1 1.000 - - FOG0001688
OrthoInspector 1 1.000 - - otm44150
orthoMCL 1 0.900 - - OOG6_106240
Panther 1 1.100 - - LDO PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2523
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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