DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and Klf1

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_006255316.1 Gene:Klf1 / 304666 RGDID:1309398 Length:381 Species:Rattus norvegicus


Alignment Length:242 Identity:83/242 - (34%)
Similarity:106/242 - (43%) Gaps:62/242 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 LGSGQHL--LQDTYKSMLPGQGVGVGVGVGMGGFSLPHSSPSAAAAA------AATAAAAAGGSP 339
            |||.:|.  ...|.:...|...|...:..|:...:.|..|.|.|.:|      |..|..||..:|
  Rat   144 LGSEEHAGWAHPTPRPPTPEPFVAPVLAPGLAPKAQPAFSESRAVSAGGFFPRAGLAVPAAPSAP 208

  Fly   340 QG---GSPST-PSPRSQRRY-------AGRATCDCP----NCQEAERLGPAGVHL---------- 379
            .|   |.|:. |:|:.|..:       |..|....|    ||     |||..|..          
  Rat   209 YGLLSGYPALYPAPQYQGHFQLFRGLAAPSAGPTAPPSFLNC-----LGPGAVGTELGATAIAGD 268

  Fly   380 -------------------RKKNIHSCHIPGCGKVYGKTSHLKAHLRWHT-----GERPFVCNWL 420
                               :::..|:|...||||.|.|:||||||||.||     ||:|:.|:|.
  Rat   269 AGLSPGAAPPKRSRRTLAQKRQAAH
TCGHEGCGKSYTKSSHLKAHLRTHTAPCPSGEKPYACSWD 333

  Fly   421 FCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTH 467
            .|..||.|||||.||.|.|||.:.|.|.:|.:.|.||||||.|:|.|
  Rat   334 GCNWRFARSDELTRHYRKHTGHRPFCCGLCPRAFSRSDHLALHMKRH 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 33/154 (21%)
C2H2 Zn finger 390..409 CDD:275368 14/18 (78%)
zf-H2C2_2 401..428 CDD:463886 17/31 (55%)
C2H2 Zn finger 417..439 CDD:275368 13/21 (62%)
zf-H2C2_2 431..454 CDD:463886 11/22 (50%)
zf-C2H2 445..467 CDD:395048 12/21 (57%)
C2H2 Zn finger 447..467 CDD:275368 11/19 (58%)
Klf1XP_006255316.1 KLF1_N 28..293 CDD:409227 33/153 (22%)
COG5048 <297..>380 CDD:227381 47/82 (57%)
C2H2 Zn finger 298..317 CDD:275368 14/18 (78%)
C2H2 Zn finger 330..352 CDD:275368 13/21 (62%)
C2H2 Zn finger 360..380 CDD:275368 11/19 (58%)

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