DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and Sp2

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_038942006.1 Gene:Sp2 / 303499 RGDID:1592078 Length:636 Species:Rattus norvegicus


Alignment Length:650 Identity:176/650 - (27%)
Similarity:235/650 - (36%) Gaps:242/650 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SNIATHLQKPQ-----VNPD---HPSLRGT------PLAMLAAQCNKLSNKSPPPLADAAV---- 71
            ||..|..|...     |:|.   .|:...|      |||:|||.|:|:.    ||..:|||    
  Rat    22 SNATTDSQMSMAATAAVSPSDYLQPAAAATQDSQPSPLALLAATCSKIG----PPAVEAAVTPPA 82

  Fly    72 -----GKGFHPWKKS--PNSPAAGSSGSSGGGGG-----GGGSSA----GQ-----HSPCAISAA 115
                 .:...|.|.:  |.||...|.......|.     |...||    ||     .:|..|:..
  Rat    83 PPQPTPRKLVPIKPAPLPLSPCKNSFSILSSKGNILQIQGSQLSASYPGGQFVFAIQNPTLINKG 147

  Fly   116 SSSSSS-----GSSGGQSSRSL---------------SSSASTMVNITASRPLASSCAAVGGGST 160
            |.|::|     ....|.||:::               ::.|....:.:..:|:....|.|...:|
  Rat   148 SRSNASIQYQVPQIQGNSSQTIQVQPNLTNQIQIIPGTNQAIITPSTSGHKPVPIKPAPVQKSNT 212

  Fly   161 GSSSSASGSQSSSTASAVAAAYGGDLYFPNTSTSNMDNHHMHQGLLGKVEAGAAAFGGVYSRHPY 225
            .::...||      |:.|....||.   ..|.|..::|      |:...:.||.|  .:.:..| 
  Rat   213 TTTPVQSG------ANVVKLTGGGG---NMTLTLPLNN------LVNTSDIGAPA--QLLTESP- 259

  Fly   226 DWPFNAVTHKEAASVNSGWWDMHSAAGSWLDMGGAGMHSTMANYASENYSSALSHSLL----GSG 286
            ..|.:. |:|:|...:........|....::       :.:....:||...|.::.|:    |.|
  Rat   260 PTPLSK-TNKKARKKSLPVSQPSVAVAEQVE-------TVLIETTAENIIQAGNNLLIVQSPGGG 316

  Fly   287 QHLL-----------QDTYKSMLPGQGVGVGVGVGMGGFSLP----------------------- 317
            |..:           :......:|.|.:.|   |.....:||                       
  Rat   317 QPAVVQQVQVVPPKAEQQQVVQIPQQALRV---VQAASATLPTVPQKPSQNFQIQTTEPTPTQVY 378

  Fly   318 -------------HSSPSAAAA------------------------------------------- 326
                         ..||.|.||                                           
  Rat   379 IRTPSGEVQTVLVQDSPPATAATTSTVSCSSPALRAPHLSGSSKKHSAAILRKERPLPKIAPAGS 443

  Fly   327 -----AAATAAAA----------------------AGGSPQ--------------GGSPSTPSPR 350
                 ||..||||                      .||..|              |.||:....:
  Rat   444 IISLNAAQLAAAAQAMQTININGVQVQGVPVTITNTGGQQQLTVQNVSGNNLTISGLSPTQIQLQ 508

  Fly   351 SQRRYAG---------RATCDCPNCQEAE-RLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAH 405
            .::..||         |..|.||||::.| |.|..|   :||  |.||||.|||.:.|||.|:||
  Rat   509 MEQALAGEAQPGEKRRRMACTCPNCKDGEKRSGEQG---KKK--HVCHIPDCGKTFRKTSLLRAH 568

  Fly   406 LRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTHNGT 470
            :|.|||||||||||.|||||||||||||||.|||||:|||.|..|.|||||||||.||.|||.||
  Rat   569 VRLHTGERPFVCNWFFCGKRFTRSDELQRHARTHTGDKRFECAQCQKRFMRSDHLTKHYKTHLGT 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 98/525 (19%)
C2H2 Zn finger 390..409 CDD:275368 11/18 (61%)
zf-H2C2_2 401..428 CDD:463886 21/26 (81%)
C2H2 Zn finger 417..439 CDD:275368 19/21 (90%)
zf-H2C2_2 431..454 CDD:463886 16/22 (73%)
zf-C2H2 445..467 CDD:395048 15/21 (71%)
C2H2 Zn finger 447..467 CDD:275368 14/19 (74%)
Sp2XP_038942006.1 SP2_N 33..549 CDD:411776 105/553 (19%)
C2H2 Zn finger 553..572 CDD:275368 11/18 (61%)
zf-H2C2_2 565..591 CDD:463886 21/25 (84%)
C2H2 Zn finger 580..602 CDD:275368 19/21 (90%)
zf-H2C2_2 594..617 CDD:463886 16/22 (73%)
zf-C2H2 608..630 CDD:395048 15/21 (71%)
C2H2 Zn finger 610..630 CDD:275368 14/19 (74%)

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