DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp1 and Klf10

DIOPT Version :9

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_036015210.1 Gene:Klf10 / 21847 MGIID:1101353 Length:547 Species:Mus musculus


Alignment Length:481 Identity:131/481 - (27%)
Similarity:187/481 - (38%) Gaps:121/481 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SNIATHLQKPQVNP------DHPSLRGTP-LAMLAAQC---------------NKLSNKSP---- 63
            |:...:|:...|.|      |...|.||| |..:.|.|               :.|:..:|    
Mouse   121 SHFKKYLENRPVTPVSDTSEDDSLLPGTPDLQTVPAFCLTPPYSPSDFEPSQGSNLTASAPSTGH 185

  Fly    64 -PPLADAAVGKGFHPWKKSPNSPAAG----SSGSSGGGGGGGGSSAGQHSPCAISAASSSSSSGS 123
             ...:|||...|..|:|:...:|.|.    .:.::........:....|..|.:.|||..:...:
Mouse   186 FKSFSDAAKPPGATPFKEEEKNPLAAPPLPKAQATSVIRHTADAQLCNHQSCPVKAASILNYQDN 250

  Fly   124 SGGQSSRSLSSSASTMVNITASRPLASSCAAVGGGSTGSSSSASGSQSSSTASAVAAAYGGDLYF 188
            |..:  |:..:..:|..||        .||||   |...|.....:.|.....|.||.|  |...
Mouse   251 SFRR--RTHGNVEATRKNI--------PCAAV---SPNRSKPEPSTVSDGDEKAGAALY--DFAV 300

  Fly   189 PNTST-----SNMDNHHMHQGLLGKVEAGAAAFGGVYSRHPYDWPFNAVTHKEAASVNSGWWDMH 248
            |::.|     ....:..:.:.:|  |.:...:.|||    |   |...:........|:      
Mouse   301 PSSETVICRSQPAPSSPVQKSVL--VSSPTVSTGGV----P---PLPVICQMVPLPANN------ 350

  Fly   249 SAAGSWLDMGGAGMHSTMANYASENYSSALSHSLLGSGQHLLQDTYKSMLPGQGVGVGVGVGMGG 313
                        .:.||:......:...|:...:|..|..:.:.|...::|...|          
Mouse   351 ------------SLVSTVVPSTPPSQPPAVCSPVLFMGTQVPEGTVVFVVPQPVV---------- 393

  Fly   314 FSLPHSSPSAAAAAAATAAAAAGGSPQGG--SPSTPSPRSQRRYAGRATCDCPNCQEAERLGPAG 376
                 .||.....           ||.|.  ||..|:|...              ..|.|:.|. 
Mouse   394 -----QSPRPPVV-----------SPSGTRLSPIAPAPGFS--------------PSAARVTPQ- 427

  Fly   377 VHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTG 441
            :...:...|.|..|||||.|.|:||||||:|.||||:||.|:|..|.:||.|||||.||.|||||
Mouse   428 IDSSRVRSHICSHPGCGKTYFKSSHLKAHVRTHTGEKPFSCSWKGCERRFARSDELSRHRRTHTG 492

  Fly   442 EKRFACPVCNKRFMRSDHLAKHVKTH 467
            ||:||||:|::||||||||.||.:.|
Mouse   493 EKKFACPMCDRRFMRSDHLTKHARRH 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 C2H2 Zn finger 390..409 CDD:275368 14/18 (78%)
zf-H2C2_2 401..428 CDD:290200 17/26 (65%)
C2H2 Zn finger 417..439 CDD:275368 13/21 (62%)
zf-H2C2_2 431..454 CDD:290200 16/22 (73%)
zf-C2H2 445..467 CDD:278523 15/21 (71%)
C2H2 Zn finger 447..467 CDD:275368 13/19 (68%)
Klf10XP_036015210.1 KLF10_N 101..436 CDD:409241 74/397 (19%)
COG5048 441..>491 CDD:227381 34/49 (69%)
C2H2 Zn finger 441..460 CDD:275368 14/18 (78%)
C2H2 Zn finger 468..490 CDD:275368 13/21 (62%)
zf-C2H2 496..518 CDD:395048 15/21 (71%)
C2H2 Zn finger 498..518 CDD:275368 13/19 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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