DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and klf-3

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001022205.1 Gene:klf-3 / 191713 WormBaseID:WBGene00003480 Length:315 Species:Caenorhabditis elegans


Alignment Length:167 Identity:68/167 - (40%)
Similarity:88/167 - (52%) Gaps:26/167 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 PHSSPSAAAAAAATAAAAAGGS------PQGG-------SPS--TPSPRSQRRYAGRATCDCPNC 366
            |.|||..:....|:...|....      |..|       |||  |.|.||..:...|.       
 Worm   158 PPSSPENSFGPLASQLPAIKMEIPMHPLPHNGELDSTRSSPSSTTSSERSPLQRKSRI------- 215

  Fly   367 QEAERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDE 431
             |:.:..|..   :|..:|:|..|||.|.|.|:||||||.|.|:||:||||.|..|..:|.||||
 Worm   216 -ESNKRNPTD---KKFVVHACTYPGCFKKYSKSSHLKAHERTHSGEKPFVCKWQNCSWKFARSDE 276

  Fly   432 LQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTHN 468
            |.||:|.|||:|.|.|.:|::.|.|||||:.|:|.|:
 Worm   277 LTRHMRKHTGDKPFRCSLCDRNFARSDHLSLHMKRHS 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 19/83 (23%)
C2H2 Zn finger 390..409 CDD:275368 13/18 (72%)
zf-H2C2_2 401..428 CDD:463886 16/26 (62%)
C2H2 Zn finger 417..439 CDD:275368 12/21 (57%)
zf-H2C2_2 431..454 CDD:463886 12/22 (55%)
zf-C2H2 445..467 CDD:395048 11/21 (52%)
C2H2 Zn finger 447..467 CDD:275368 10/19 (53%)
klf-3NP_001022205.1 SFP1 <215..314 CDD:227516 52/110 (47%)
C2H2 Zn finger 235..254 CDD:275368 13/18 (72%)
C2H2 Zn finger 262..284 CDD:275368 12/21 (57%)
zf-H2C2_2 276..301 CDD:463886 13/24 (54%)
C2H2 Zn finger 292..312 CDD:275368 10/19 (53%)

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