DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and sptf-1

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001021465.1 Gene:sptf-1 / 172909 WormBaseID:WBGene00009743 Length:298 Species:Caenorhabditis elegans


Alignment Length:321 Identity:88/321 - (27%)
Similarity:140/321 - (43%) Gaps:66/321 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 GGQSSRSLSSSASTMVNITASRPLASSCAAVGGGSTGSSSSASGSQSSSTASAVAAAYGGDLYFP 189
            ||.||..:.|..|.        |..:|.|..|.......::.:...:.:.|::||.::.......
 Worm     2 GGASSPRIPSRRSA--------PYFTSLAFFGSSYIKVKNNRNKMLNPTDAASVALSFSVPFQMS 58

  Fly   190 NTSTSNMDNHHMHQGLLG---KVEAGAA--------AFGGVYSRHPY-----------DWPFNAV 232
            ..:..:....|.::.:.|   |::|..|        .....||  ||           .||....
 Worm    59 GENPLSKLVEHCNKFVPGADIKMKAEPAKPESLLLPTDMNAYS--PYLATPNWWVDQTGWPQLYP 121

  Fly   233 THKEAASVNSGWWDMHSAAGSWLDMGGAGMHSTMANYASE-----NYSSALS-----HSLLGSGQ 287
            |...|:||     |::....:...:||. :.|:::..||:     |..|||:     .::..|.|
 Worm   122 TVTTASSV-----DVYQNYLASSQLGGL-LSSSVSAVASQLPAGINAQSALNITSQQRTIAKSFQ 180

  Fly   288 HLLQDTYKSMLPGQGVGVGVGVGMGGFSLPHSSPSAAAAAAATAAAAAGGSPQGGSPSTPSPRSQ 352
            |.......|.:|..            .:..:||.::..::.:.:.:|.|.|..||:...||.|:.
 Worm   181 HTKPMASSSSIPSV------------LTASNSSANSLVSSGSESVSARGTSGSGGTGKYPSSRTA 233

  Fly   353 RRYAGRATCDCPNCQEAERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGER 413
            .:      |:||||.|.|:.||..:..||:.:|:|||.||||||.|:||||||||||:|||
 Worm   234 NK------CECPNCHEIEKFGPNAIAARKRGVHNCHIAGCGKVYNKSSHLKAHLRWHSGER 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 64/292 (22%)
C2H2 Zn finger 390..409 CDD:275368 15/18 (83%)
zf-H2C2_2 401..428 CDD:463886 12/13 (92%)
C2H2 Zn finger 417..439 CDD:275368
zf-H2C2_2 431..454 CDD:463886
zf-C2H2 445..467 CDD:395048
C2H2 Zn finger 447..467 CDD:275368
sptf-1NP_001021465.1 SP6-9_N <162..261 CDD:425402 29/116 (25%)
zf-C2H2 260..284 CDD:395048 19/23 (83%)
C2H2 Zn finger 262..284 CDD:275370 18/21 (86%)
Blue background indicates that the domain is not in the aligned region.

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