DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp1 and Klf4

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_034767.2 Gene:Klf4 / 16600 MGIID:1342287 Length:483 Species:Mus musculus


Alignment Length:568 Identity:132/568 - (23%)
Similarity:178/568 - (31%) Gaps:248/568 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 KSPPPLADAAVGKGFHP-------------------------W-------KKSPNSPA----AGS 89
            :.||..:|.||.....|                         |       |:.|..|.    ..:
Mouse     2 RQPPGESDMAVSDALLPSFSTFASGPAGREKTLRPAGAPTNRWREELSHMKRLPPLPGRPYDLAA 66

  Fly    90 SGSSGGGGGGGGSSAGQHSPCAISAASSSSSSG--SSGGQSSRSLSSSASTMVNITASRPLASSC 152
            :.::....||.|::...::|..::...:...:.  ......|.||:...|....:|.|       
Mouse    67 TVATDLESGGAGAACSSNNPALLARRETEEFNDLLDLDFILSNSLTHQESVAATVTTS------- 124

  Fly   153 AAVGGGSTGSSSSASGSQSSSTASAVAAAY----GGDLYFPNTSTSNMDNHHMHQGLLGKVEAGA 213
                 .|..||||.:.|..:|..|..:.:|    |||   |..:.||...     |||       
Mouse   125 -----ASASSSSSPASSGPASAPSTCSFSYPIRAGGD---PGVAASNTGG-----GLL------- 169

  Fly   214 AAFGGVYSRH---PYDWPFNAVTHKEAASVNSGWWDMHSAAGSWLDMGGAGMHSTMANYASENYS 275
                  |||.   |...|||      .|.:|              |:..:|      .:.:|...
Mouse   170 ------YSRESAPPPTAPFN------LADIN--------------DVSPSG------GFVAELLR 202

  Fly   276 SALSHSLLGSGQHLLQDTYKSMLPGQGVGVGVGVGMGGFSL---------PHSSPSAAAAAAATA 331
            ..|....:...|        ...||.|:       ||.|.|         .:||||..:.:.   
Mouse   203 PELDPVYIPPQQ--------PQPPGGGL-------MGKFVLKASLTTPGSEYSSPSVISVSK--- 249

  Fly   332 AAAAGGSPQGGSPSTPSPRSQRRYAGRATCDCPNC-QEA-------------------------- 369
                 |||.|..|...:|     |:|.....||.. |||                          
Mouse   250 -----GSPDGSHPVVVAP-----YSGGPPRMCPKIKQEAVPSCTVSRSLEAHLSAGPQLSNGHRP 304

  Fly   370 ----------------------------------------------------------------- 369
                                                                             
Mouse   305 NTHDFPLGRQLPTRTTPTLSPEELLNSRDCHPGLPLPPGFHPHPGPNYPPFLPDQMQSQVPSLHY 369

  Fly   370 ERLGPAGVHL--------------RKKN-IHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNW 419
            :.|.|.|..|              ||:. .|:|...||||.|.|:||||||||.||||:|:.|:|
Mouse   370 QELMPPGSCLPEEPKPKRGRRSWPRKRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDW 434

  Fly   420 LFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTH 467
            ..||.:|.|||||.||.|.|||.:.|.|..|::.|.||||||.|:|.|
Mouse   435 DGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 82/485 (17%)
C2H2 Zn finger 390..409 CDD:275368 14/18 (78%)
zf-H2C2_2 401..428 CDD:463886 17/26 (65%)
C2H2 Zn finger 417..439 CDD:275368 13/21 (62%)
zf-H2C2_2 431..454 CDD:463886 11/22 (50%)
zf-C2H2 445..467 CDD:395048 12/21 (57%)
C2H2 Zn finger 447..467 CDD:275368 11/19 (58%)
Klf4NP_034767.2 KLF4_N 7..400 CDD:409228 80/479 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..42 0/19 (0%)
9aaTAD. /evidence=ECO:0000250|UniProtKB:O43474 99..107 0/7 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 294..395 4/100 (4%)
Interaction with ZNF296. /evidence=ECO:0000269|PubMed:24161396 386..483 52/97 (54%)
COG5048 <395..478 CDD:227381 48/82 (59%)
C2H2 Zn finger 402..424 CDD:275368 15/21 (71%)
C2H2 Zn finger 432..454 CDD:275368 13/21 (62%)
Interaction with target DNA 443..474 17/30 (57%)
zf-H2C2_2 446..471 CDD:463886 12/24 (50%)
C2H2 Zn finger 462..482 CDD:275368 11/19 (58%)

Return to query results.
Submit another query.