DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and klf2b

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_571932.1 Gene:klf2b / 117509 ZFINID:ZDB-GENE-011109-2 Length:363 Species:Danio rerio


Alignment Length:417 Identity:111/417 - (26%)
Similarity:145/417 - (34%) Gaps:141/417 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 LSSSASTMVN-----------ITASRPLASSCAAVGGGSTGSSSSASGSQSSSTASAVAAAYGGD 185
            |..|.||..|           |...:||.:||..:....  ::.:..|.:.....|...     |
Zfish     6 LLPSISTFANQKEKLWEDRWKIEEHKPLNASCPPLNVAL--NTDTCRGRKDDEDLSNYL-----D 63

  Fly   186 LYFPNTSTSNMDNHHMHQGLLGKVEAGAAAFG-----GVYSRHPYDW-----PFNAVTHKEAASV 240
            |.|...:|:            |.:||||....     |:||...|..     |:..:.....:.|
Zfish    64 LEFILANTT------------GPLEAGAEFISHSEPCGMYSTAVYSSPEAPPPYGLMAELLRSDV 116

  Fly   241 NSGWWDMHSAAGSWL------------------DMGGAG-----MHSTMANYASE-NYSSALSHS 281
            :| .:|. :..|.:|                  .|.|.|     :..|......| |.|..:|..
Zfish   117 DS-TYDT-TVQGRFLLNSSGFPRQEFPEIKVEPPMDGYGPVIGMVPQTCQKIKQEGNVSCMMSFE 179

  Fly   282 -----------------LLGSGQHLLQDTYKSMLPGQGVGVGVGVGMGGFSLPHSSPS------- 322
                             |.....||.|.||..                  |..||.|:       
Zfish   180 QPRLAVSPQATGNMTPPLSPDDSHLRQTTYTQ------------------SYHHSPPAYPQVPMQ 226

  Fly   323 -AAAAAAATAAAAAGGSPQG-----GSPSTP------SPRSQRRYAGRATCDCPNCQEAERLGPA 375
             .|....|....|.|..|..     ..||:|      .|:..||...|                 
Zfish   227 FTAPHQFAMYEEAMGMQPSMQRALLTPPSSPLELMESKPKRGRRTWPR----------------- 274

  Fly   376 GVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHT 440
                ::...|:|...||||.|.|:||||||.|.||||:|:.|||..||.:|.|||||.||.|.||
Zfish   275 ----KRMATHTCTYAGCGKTYTKSSHLKAHHRTHTGEKPYHCNWEGCGWKFARSDELTRHFRKHT 335

  Fly   441 GEKRFACPVCNKRFMRSDHLAKHVKTH 467
            |.:.|.|.:|.:.|.||||||.|:|.|
Zfish   336 GHRPFQCHLCERAFSRSDHLALHMKRH 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 61/334 (18%)
C2H2 Zn finger 390..409 CDD:275368 13/18 (72%)
zf-H2C2_2 401..428 CDD:463886 17/26 (65%)
C2H2 Zn finger 417..439 CDD:275368 14/21 (67%)
zf-H2C2_2 431..454 CDD:463886 11/22 (50%)
zf-C2H2 445..467 CDD:395048 12/21 (57%)
C2H2 Zn finger 447..467 CDD:275368 11/19 (58%)
klf2bNP_571932.1 KLF2_N 5..280 CDD:409229 61/333 (18%)
COG5048 <275..358 CDD:227381 47/82 (57%)
C2H2 Zn finger 282..304 CDD:275368 14/21 (67%)
C2H2 Zn finger 312..334 CDD:275368 14/21 (67%)
zf-H2C2_2 326..351 CDD:463886 12/24 (50%)
C2H2 Zn finger 342..362 CDD:275368 11/19 (58%)

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