DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and LOC101885363

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001430203.1 Gene:LOC101885363 / 101885363 -ID:- Length:369 Species:Danio rerio


Alignment Length:156 Identity:52/156 - (33%)
Similarity:67/156 - (42%) Gaps:34/156 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 RRYAGRATCDCPNCQEAERL-GPAGVHLRKKNIHSCHIP----GCGKVYGKTSHLKAHLRWHTGE 412
            |.:.|.....|..|.::.|| |....|:|   ||:...|    .|||..|:.:.||.|:|.||||
Zfish   178 RIHTGERPFTCTQCGKSFRLYGSFKTHMR---IHTGERPFTCTQCGKSLGRLASLKTHMRIHTGE 239

  Fly   413 RPFVCNWL--------------------------FCGKRFTRSDELQRHLRTHTGEKRFACPVCN 451
            |||.|...                          .|||.|..|.:|:.|||.||.||.::|..|.
Zfish   240 RPFNCTQCGKSFRQSATFNLHMRIHTGKKPHKCDQCGKTFLSSSQLKMHLRVHTKEKPYSCSECG 304

  Fly   452 KRFMRSDHLAKHVKTHNGTANHQANG 477
            |.|.:..:|.:|.|.|.|...|...|
Zfish   305 KSFAQQSNLQRHQKIHTGVKEHMCFG 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 10/33 (30%)
C2H2 Zn finger 390..409 CDD:275368 9/22 (41%)
zf-H2C2_2 401..428 CDD:463886 16/52 (31%)
C2H2 Zn finger 417..439 CDD:275368 10/47 (21%)
zf-H2C2_2 431..454 CDD:463886 11/22 (50%)
zf-C2H2 445..467 CDD:395048 7/21 (33%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
LOC101885363NP_001430203.1 None

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