DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and sp8

DIOPT Version :9

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001278991.1 Gene:sp8 / 100492429 XenbaseID:XB-GENE-1216189 Length:520 Species:Xenopus tropicalis


Alignment Length:634 Identity:253/634 - (39%)
Similarity:306/634 - (48%) Gaps:205/634 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 DHPSLRGTPLAMLAAQCNKLSNKSPPP--LAD--AAVGKGFHPWKKSPNSP-----AAGS-SGSS 93
            :.|.|..||||||||.|||:.:.||.|  |:|  |:.||||||||:|.::.     |:|| ||.|
 Frog     8 EEPRLGSTPLAMLAATCNKIGSPSPSPSSLSDSSASFGKGFHPWKRSSSTSSSCTLASGSLSGFS 72

  Fly    94 GGG---GGGGGSSAGQHSPCAISAA------SSSSSSGSSGGQSSRSLSSSASTMVNITASRPLA 149
            .||   ||.|.|||...:..|.:||      |.|.|.|.|.|.|:.||:|.             .
 Frog    73 VGGSSRGGNGSSSAAAAAAAAAAAAAAAALVSDSFSCGGSPGSSAFSLTSG-------------V 124

  Fly   150 SSCAAVGGGSTGSSSSAS-------------GSQSSSTASAVAAAYGGDLYFPNTSTSNMDNHHM 201
            |.....||||:||.|:||             |||.::.|:|.|||          :.:...:|| 
 Frog   125 SGGGGGGGGSSGSVSAASPFANEYSVFPVSGGSQEAAAAAAAAAA----------AAAAAASHH- 178

  Fly   202 HQGLLGKVEAGAAAFGGVYSR----HPYDWPFNAVTHKE----AASVNSGWWDMHSAAGSWLDM- 257
            ....|.||.|.......:|.|    |||:..|......|    ||...|.||::  .|| |:|: 
 Frog   179 QPVFLSKVHASVDGLQSIYPRVGMAHPYESWFKPSHPGEVSAAAAGGASSWWEV--GAG-WIDVQ 240

  Fly   258 -GGAG-----------MHSTMANYASENYSSAL-----------------------------SHS 281
             .|||           :||.:..|.::..::.|                             ||.
 Frog   241 SPGAGAALHPGALQGSLHSPLGGYGTDYSAAGLGHFSAGGGGGAGSGGGAAGAGNGGGGGPGSHL 305

  Fly   282 LLGSGQHLLQDTYKSMLPGQGVGVGVGVGMGGFSLPHSSPSAAAAAAATAAAAAGGSPQGGSPST 346
            |...|||:: |.:|.:           :|.|.:..|.|||.:|.:..|..      .|.||||.:
 Frog   306 LSSGGQHIM-DGFKPV-----------IGPGSYPDPSSSPLSAGSMLAPT------GPLGGSPRS 352

  Fly   347 PSPRSQRRYAGRATCDCPNCQEAERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTG 411
                |.|||:||||||||||||||||||||..||:|.:|||||||||||||||||||||||||||
 Frog   353 ----SARRYSGRATCDCPNCQEAERLGPAGASLRRKGLHSCHIPGCGKVYGKTSHLKAHLRWHTG 413

  Fly   412 ERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTHNGTANHQAN 476
            |||||||||||||||||||||||||||||||||||||||||||||||||:||||||:        
 Frog   414 ERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTHS-------- 470

  Fly   477 GHNGGLKKGSSESCSDSEEAANQSGESNGLGGVGSGPQTGGAGGGGGGSSSGNGAGTLAVSGSVT 541
                                                  .||||||.|                 :
 Frog   471 --------------------------------------AGGAGGGAG-----------------S 480

  Fly   542 TGAGAGSGTGSSNSNSNSGGSSGSVSGSVSGSGSHPGTPTSLHAHSANG 590
            ||.|:||..||...:.:|..:|....           :|..||....||
 Frog   481 TGPGSGSKKGSDTDSEHSPSTSPPCH-----------SPDLLHPPDRNG 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 C2H2 Zn finger 390..409 CDD:275368 18/18 (100%)
zf-H2C2_2 401..428 CDD:290200 26/26 (100%)
C2H2 Zn finger 417..439 CDD:275368 21/21 (100%)
zf-H2C2_2 431..454 CDD:290200 22/22 (100%)
zf-C2H2 445..467 CDD:278523 20/21 (95%)
C2H2 Zn finger 447..467 CDD:275368 18/19 (95%)
sp8NP_001278991.1 C2H2 Zn finger 392..411 CDD:275368 18/18 (100%)
zf-H2C2_2 403..430 CDD:372612 26/26 (100%)
C2H2 Zn finger 419..441 CDD:275368 21/21 (100%)
zf-H2C2_2 433..456 CDD:372612 22/22 (100%)
zf-C2H2 447..469 CDD:333835 20/21 (95%)
C2H2 Zn finger 449..469 CDD:275368 18/19 (95%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 159 1.000 Domainoid score I4041
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 352 1.000 Inparanoid score I2214
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D295820at33208
OrthoFinder 1 1.000 - - FOG0001688
OrthoInspector 1 1.000 - - otm49329
Panther 1 1.100 - - LDO PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2523
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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