DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp1 and sp7

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001128590.1 Gene:sp7 / 100189548 XenbaseID:XB-GENE-954330 Length:427 Species:Xenopus tropicalis


Alignment Length:520 Identity:174/520 - (33%)
Similarity:220/520 - (42%) Gaps:153/520 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 TPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSPNSPAAGSSGSSGGGGGG-----GGSSAG 105
            :|||||.|.|||....||...:.::...|.    |.|.|.....|.|...|.|.     |||:. 
 Frog    15 SPLAMLTAACNKFGGSSPIRDSTSSSKSGV----KKPYSQTNEFSASKLMGDGYSSAYLGGSNI- 74

  Fly   106 QHSPCAISAASSSSSSGSSGGQSSRSLSSSASTMVNITASRPLASSCAAVGGGSTGSSSSASGSQ 170
             .:||....|  .|:.|...|..|.|.|                            |||.....:
 Frog    75 -MTPCGTPPA--PSNYGGDFGSFSHSFS----------------------------SSSGCQEPK 108

  Fly   171 SSSTASAVAAAYGGDLYFPNTSTSNMDNHHMHQGLLGKVEAGAAAFGGVYSRHPY-DWPFNAVTH 234
            |.|.|..|.:.|           :::|        :|               ||| .|....:.|
 Frog   109 SLSPAECVPSVY-----------TSLD--------MG---------------HPYGSWYKTGIHH 139

  Fly   235 KEAASVNSG----WWDMHSAAGSWL------------------DMGGAGMHS------TMANYAS 271
            ...:|...|    |||||... :||                  .:|.:..:|      |.|.|.|
 Frog   140 PSLSSSPPGSGGSWWDMHPNT-NWLGNQSQPDGLAASMPPVTSPVGMSSQYSAEYTTLTPATYPS 203

  Fly   272 ENYSSALSHSLLGSGQHLLQDTYKSMLPGQGVGVGVGVGMGGFSLPHSSPSAAAAAAATAAAAAG 336
            ..:.|....|......|||..:..::.|..                 ..|...||          
 Frog   204 VGFPSISPSSSPSPSSHLLSPSQHTLAPEM-----------------YKPKLLAA---------- 241

  Fly   337 GSPQGGSPSTPSPRSQRRY--AGRATCDCPNCQEAERLGPAGVHLRKKNIHSCHIPGCGKVYGKT 399
             :|...:|.:...:....|  :||.:||||||||.||||.:...|::|.:||||||||||||||.
 Frog   242 -NPLLETPGSLKAQRGTSYGNSGRPSCDCPNCQELERLGASAASLKRKPVHSCHIPGCGKVYGKA 305

  Fly   400 SHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHV 464
            |||||||||||||||||||||||||||||||||:||:||||.||:|.||:|.|||.|||||:||.
 Frog   306 SHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELERHVRTHTREKKFTCPLCAKRFTRSDHLSKHQ 370

  Fly   465 KTH---NGTANHQANGHNGGLKKGSSES---CSDSEEAANQSGESNGLGGVGSGPQTGGAGGGGG 523
            ::|   .|..:....|..|.:.:.|:|.   .|||..|.            ||..:..|:.|.||
 Frog   371 RSHVDQPGAKDDGVQGDGGAVGESSAEKGIVLSDSSPAG------------GSQERASGSPGQGG 423

  Fly   524  523
             Frog   424  423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 86/371 (23%)
C2H2 Zn finger 390..409 CDD:275368 17/18 (94%)
zf-H2C2_2 401..428 CDD:463886 26/26 (100%)
C2H2 Zn finger 417..439 CDD:275368 19/21 (90%)
zf-H2C2_2 431..454 CDD:463886 15/22 (68%)
zf-C2H2 445..467 CDD:395048 14/21 (67%)
C2H2 Zn finger 447..467 CDD:275368 13/19 (68%)
sp7NP_001128590.1 SP6-9_N 2..292 CDD:425402 89/375 (24%)
C2H2 Zn finger 296..315 CDD:275368 17/18 (94%)
zf-H2C2_2 307..334 CDD:463886 26/26 (100%)
C2H2 Zn finger 323..345 CDD:275368 19/21 (90%)
zf-H2C2_2 337..362 CDD:463886 17/24 (71%)
C2H2 Zn finger 353..373 CDD:275368 13/19 (68%)

Return to query results.
Submit another query.