DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and klf13

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001093690.1 Gene:klf13 / 100101699 XenbaseID:XB-GENE-479837 Length:258 Species:Xenopus tropicalis


Alignment Length:203 Identity:89/203 - (43%)
Similarity:109/203 - (53%) Gaps:32/203 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 PGQGVGVGVGVGMGGFSLPHSSPSAAAAAAATAAAAAGGSPQGGSPSTPSPRSQRRYAGRATCDC 363
            ||:....|:.:...|.......|   |...|..||.....|:      |||: ||...|::.|| 
 Frog    75 PGEKAECGISLLPAGNEADREPP---AGKRADRAATPPLLPE------PSPK-QRARRGKSRCD- 128

  Fly   364 PNCQEAERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTR 428
            |...           |:|   |.|...||.|||||:||||||||.|||||||.|:|..|.|:|.|
 Frog   129 PESP-----------LKK---HKCPYSGCEKVYGKSSHLKAHLRTHTGERPFECSWDECNKKFAR 179

  Fly   429 SDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTHNGTANHQAN---GHNG-GLKKGSSES 489
            ||||.||.|||||||:|:||:|.|||||||||.||.:.|   ||.|.:   |..| ..:.||...
 Frog   180 SDELARHYRTHTGEKKFSCPICEKRFMRSDHLTKHARRH---ANFQPSMLKGRGGISSRNGSVSD 241

  Fly   490 CSDSEEAA 497
            .|.|:.::
 Frog   242 YSRSDASS 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 21/86 (24%)
C2H2 Zn finger 390..409 CDD:275368 15/18 (83%)
zf-H2C2_2 401..428 CDD:463886 19/26 (73%)
C2H2 Zn finger 417..439 CDD:275368 13/21 (62%)
zf-H2C2_2 431..454 CDD:463886 16/22 (73%)
zf-C2H2 445..467 CDD:395048 15/21 (71%)
C2H2 Zn finger 447..467 CDD:275368 14/19 (74%)
klf13NP_001093690.1 KLF13_N 7..137 CDD:409236 21/86 (24%)
COG5048 <131..230 CDD:227381 65/115 (57%)
C2H2 Zn finger 138..160 CDD:275368 16/21 (76%)
C2H2 Zn finger 168..190 CDD:275368 13/21 (62%)
C2H2 Zn finger 198..218 CDD:275368 14/19 (74%)

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