DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp1 and klf5a

DIOPT Version :10

Sequence 1:NP_001259388.1 Gene:Sp1 / 31913 FlyBaseID:FBgn0020378 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_021326892.1 Gene:klf5a / 100006043 ZFINID:ZDB-GENE-090312-167 Length:429 Species:Danio rerio


Alignment Length:388 Identity:111/388 - (28%)
Similarity:144/388 - (37%) Gaps:126/388 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 SGSQSSSTASAVAAAYGGDLYFPNTSTSNMDNHHMHQGLLGKVEAGAAAFGGVYSRHPYDWPFNA 231
            |..:|.||.........|..|..|.:....|..::..||   ..|...:........|...||  
Zfish    79 SRRESVSTMDQYFGDDHGSPYSINMNVYLPDIAYLRTGL---CRAARHSVSNQVKTEPVTAPF-- 138

  Fly   232 VTHKEAASVNSG-----------WWDMHSAAGSWLDM--GGAGM--------------------- 262
             :|.|....:||           .::.:|.:||.:|:  ..||:                     
Zfish   139 -SHPECPVSSSGPAPSALPDFTSIFNSNSTSGSGMDVVDDSAGVFVKQEMQGFDIPQDGPLFQLL 202

  Fly   263 --------------HSTMANY----------ASENYSSALSHSLLGSGQHLL--QDTYKSMLPGQ 301
                          ||.|..:          |:::|....:|....|..|.:  ||...|.|...
Zfish   203 NSELDVPDPTDPHAHSQMPTFHNLHLAAQQTAAKSYCGMAAHGYPLSHGHFVHPQDQAHSQLKMT 267

  Fly   302 GVGVGVGVGMGGFSLPHSSPSAAAAA-----------------AATAAAAAGGSPQGGSPSTPSP 349
                         .||.|.|::...:                 |||.|:...|.    :||.|:|
Zfish   268 -------------YLPPSPPTSEPGSPDRQKELLHNLTPPPSYAATIASKMAGH----APSHPTP 315

  Fly   350 RSQR----------RYAGRATCDCPNCQEAERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKA 404
            .|.|          ||..|...|                |.|:.||.|..|||.|||.|:|||||
Zfish   316 ASTRPPTTTGSMPVRYNRRTNPD----------------LEKRRIHHCDFPGCKKVYTKSSHLKA 364

  Fly   405 HLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTH 467
            |||.||||:|:.|.|..|..||.|||||.||.|.|||.|.|.|.||::.|.||||||.|:|.|
Zfish   365 HLRTHTGEKPYRCTWEGCDWRFARSDELTRHFRKHTGAKPFQCAVCSRSFSRSDHLALHMKRH 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp1NP_001259388.1 SP6-9-like_N 50..386 CDD:411694 58/305 (19%)
C2H2 Zn finger 390..409 CDD:275368 15/18 (83%)
zf-H2C2_2 401..428 CDD:463886 17/26 (65%)
C2H2 Zn finger 417..439 CDD:275368 13/21 (62%)
zf-H2C2_2 431..454 CDD:463886 13/22 (59%)
zf-C2H2 445..467 CDD:395048 13/21 (62%)
C2H2 Zn finger 447..467 CDD:275368 12/19 (63%)
klf5aXP_021326892.1 KLF5_N 3..342 CDD:410335 56/301 (19%)
COG5048 322..>408 CDD:227381 47/101 (47%)
C2H2 Zn finger 350..369 CDD:275368 15/18 (83%)
C2H2 Zn finger 377..399 CDD:275368 13/21 (62%)
zf-H2C2_2 391..416 CDD:463886 14/24 (58%)
C2H2 Zn finger 407..427 CDD:275368 12/19 (63%)

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