DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment btd and sp9

DIOPT Version :9

Sequence 1:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001072269.1 Gene:sp9 / 779722 XenbaseID:XB-GENE-5931012 Length:422 Species:Xenopus tropicalis


Alignment Length:387 Identity:132/387 - (34%)
Similarity:174/387 - (44%) Gaps:104/387 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 GSSPLYGKPPMKLELPYPQASSTGTASPNSSIQSAPSSASVSPSIFPSPAQSFASISASPSTPTT 179
            |..|.:|..|  |.:.....:..|..||.||:   |.|::.:...|....:|.:|.|...|....
 Frog     7 GEEPRFGTTP--LAMLAATCNKIGNTSPLSSL---PESSAFAKGGFHPWKRSSSSCSLGSSLGGF 66

  Fly   180 TLAPPTTAAAGALAG--------------SPTSSSPSSSAA---SAAAAAAAAAAAAADLGAAAV 227
            .:|  |:.|:|||.|              |||||:.||..:   |:|:..:...:|......:.|
 Frog    67 AVA--TSRASGALTGGTATANSAFCLASTSPTSSAFSSDYSGLFSSASGVSPQESAGQSAFISKV 129

  Fly   228 ASAAYGWNTAYSGLGPARSQFPY-AQYASDYYGNAVGMSSSAAWFSH------------------ 273
            .::|.|   .|..:|.|.   || :.|.|.::.:..| .:||.|..|                  
 Frog   130 HASAEG---LYPRVGMAH---PYESWYKSGFHSDVSG-GASAWWDVHAAGPSTWLEVQNTQGALH 187

  Fly   274 -------QERLYQP-WSSQSYPGFN--------------FDDIAFQTQLQR-------------- 302
                   |...|.| :||.::..|:              ....||:..|..              
 Frog   188 SGAAAHGQLGAYSPDFSSLTHSAFSSTGASHLLPGGQHLLTQDAFKPVLPSYPDSGGPMLSGAAG 252

  Fly   303 -------RSVR-------CTCPNCTNEMSGLPPIVGPDERGRKQHICHIPGCERLYGKASHLKTH 353
                   ||.|       |.|||| .|...|.| .|...|.:..|.||||||.::|||.||||.|
 Frog   253 TGAGGTGRSARRYSGRATCDCPNC-QEAERLGP-AGASLRRKGLHSCHIPGCGKVYGKTSHLKAH 315

  Fly   354 LRWHTGERPFLC--LTCGKRFSRSDELQRHGRTHTNYRPYACPICSKKFSRSDHLSKHKKTH 413
            ||||||||||:|  |.|||||:||||||||.||||..:.:|||:|:|:|.||||||||.|||
 Frog   316 LRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHIKTH 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368 13/18 (72%)
zf-H2C2_2 349..374 CDD:290200 21/26 (81%)
C2H2 Zn finger 365..385 CDD:275368 16/21 (76%)
zf-H2C2_2 377..402 CDD:290200 15/24 (63%)
zf-C2H2 391..413 CDD:278523 15/21 (71%)
C2H2 Zn finger 393..413 CDD:275368 14/19 (74%)
sp9NP_001072269.1 9aaTAD, inactive. /evidence=ECO:0000250|UniProtKB:P0CG40 163..171 4/7 (57%)
C2H2 Zn finger 300..319 CDD:275368 13/18 (72%)
zf-H2C2_2 311..338 CDD:372612 21/26 (81%)
C2H2 Zn finger 327..349 CDD:275368 16/21 (76%)
zf-H2C2_2 341..364 CDD:372612 14/22 (64%)
zf-C2H2 355..377 CDD:333835 15/21 (71%)
C2H2 Zn finger 357..377 CDD:275368 14/19 (74%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..422 5/6 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.