DRSC/TRiP Functional Genomics Resources

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Protein Alignment btd and sp1

DIOPT Version :10

Sequence 1:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_012812106.1 Gene:sp1 / 394744 XenbaseID:XB-GENE-853336 Length:760 Species:Xenopus tropicalis


Alignment Length:517 Identity:150/517 - (29%)
Similarity:207/517 - (40%) Gaps:145/517 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 HLHLSHQQAQQQHMQHLTQQQQQQQQQQQQQQQQQQQQQ---QPQQQQHDFLSAAALLSAPPSLS 106
            ::.:...|.....:..||...||.....|:...|.||||   |||           ::.:..::.
 Frog   341 NVQVQTSQRSTGQLSLLTDSVQQGNGNMQKDGDQNQQQQILIQPQ-----------IVQSGQTIQ 394

  Fly   107 GSSSGSSSGSSPLYGKPPMKLELPYPQASSTGTAS----PNSSIQSAPSSASV---SPSIFPSPA 164
            ...:...||                 ||.||...|    .|..||:.|::..:   :|::.|:..
 Frog   395 ALQAAQLSG-----------------QAFSTQAISQDALQNLQIQTVPNTGPIIIRTPAVGPNGQ 442

  Fly   165 QSFASIS------ASPSTPTTTLAPPTTAAAGALAGSPT-SSSPSSS-AASAAAAAAAAAAAAAD 221
            .::.:|.      .:|...|.||||....:.|....:.| :|.|:.: ..:||..::.......:
 Frog   443 VTWQTIQLQNLQVQNPQAQTITLAPMQGVSLGQSGSTNTLTSMPAGTVTVNAAQLSSMPGLQTIN 507

  Fly   222 LGAAAVASAAYGWNTAYSGLGPARSQFPYAQYASDYYGNAVGMSS-------SAAWFSHQERLYQ 279
            |||                ||.:..|....|.......||.|.:|       :.|...|.|    
 Frog   508 LGA----------------LGASGIQVHQLQGVPLTITNATGDASGHLSIHATGADGLHDE---- 552

  Fly   280 PWSSQSYPGFNFDDIAFQTQLQRRSVRCTCPNCTNEMSGLPPIVGPDERG-RKQHICHIPGCERL 343
              :|....|....|...|...:.|...||||.| .|..|.    |..:.| :||||||||||.::
 Frog   553 --NSAMEEGETSPDPQPQPGRRMRREACTCPYC-KEGEGR----GSGDPGKKKQHICHIPGCGKV 610

  Fly   344 YGKASHLKTHLRWHTGERPFLC--LTCGKRFSRSDELQRHGRTHTNYRPYACPICSKKFSRSDHL 406
            |||.|||:.|||||||||||:|  :.|||||:||||||||.||||..:.:.||.|.|:|.|||||
 Frog   611 YGKTSHLRAHLRWHTGERPFVCTWVFCGKRFTRSDELQRHKRTHTGEKKFICPECPKRFMRSDHL 675

  Fly   407 SKHKKTHFKDKKSKKVLAAEAKEQAAAAIKLEKKEKKSGKPLTPPVEFKQEQPDTTPLVNYAPYA 471
            |||.|||                         :.:|..|.|:..          ||        .
 Frog   676 SKHIKTH-------------------------QNKKGQGGPVAM----------TT--------V 697

  Fly   472 NLYQHSTSAGSSVNPPPPPPPLFQQQMTTTTSSAAASFVEQPWSSSSSRAIQPATTSASSSS 533
            ||...:.|.||:.:.|.|       |...||:..|            ..||.|...:..:||
 Frog   698 NLDTGAGSDGSAASTPTP-------QTLITTNMVA------------MEAISPEGIARLASS 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368 12/18 (67%)
zf-H2C2_2 349..374 CDD:463886 19/26 (73%)
C2H2 Zn finger 365..385 CDD:275368 15/21 (71%)
zf-H2C2_2 377..402 CDD:463886 14/24 (58%)
zf-C2H2 391..413 CDD:395048 14/21 (67%)
C2H2 Zn finger 393..413 CDD:275368 14/19 (74%)
sp1XP_012812106.1 SP1_N 57..601 CDD:411775 70/314 (22%)
zf-C2H2 600..624 CDD:395048 17/23 (74%)
C2H2 Zn finger 602..624 CDD:275368 15/21 (71%)
zf-H2C2_2 616..643 CDD:463886 19/26 (73%)
C2H2 Zn finger 632..654 CDD:275368 15/21 (71%)
zf-H2C2_2 646..669 CDD:463886 13/22 (59%)
zf-C2H2 660..682 CDD:395048 14/21 (67%)
C2H2 Zn finger 662..682 CDD:275368 14/19 (74%)

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