DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment btd and sp5

DIOPT Version :9

Sequence 1:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_989092.1 Gene:sp5 / 394696 XenbaseID:XB-GENE-1217606 Length:374 Species:Xenopus tropicalis


Alignment Length:393 Identity:131/393 - (33%)
Similarity:169/393 - (43%) Gaps:94/393 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 QQQQQQQQPQQQQHDFLSAAALLSAPPSLSGSSSGSSSGSSPLYGKPPMKLELPYPQASSTGTAS 141
            |.:.....|...:|   |..|||:|..|..|..           |..|... :.:|...:.|:.|
 Frog    17 QDRTPSASPDVGKH---SPLALLAATCSRIGQP-----------GTGPADF-IQFPYDPTIGSPS 66

  Fly   142 ----PNSSIQSAPSSASVSP----SIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTS 198
                |.::..||.||..:.|    .:..|..|..:.|.:|..|....|.||...:. ....||..
 Frog    67 RIFHPWTNEISAHSSGGIQPHNGIGLSTSKTQLASHIQSSFVTHELPLTPPADPSY-PYDYSPMK 130

  Fly   199 SSPSSSAASAAAAAAAAAAAAADLGAAAVASAAYGWNTAYSGL----------GPARSQFPYAQY 253
            ..|...||......:....|......|.:.||.:|:..::|.|          .||...      
 Frog   131 MLPPPMAAFQTGCQSPYVPAVPYAPPAPITSALHGFVPSHSNLIHQQPRQLSPNPAEDM------ 189

  Fly   254 ASDYYGNAVGMSSSAAWFSHQERLYQPWSSQS---YPGFNF-----------DDIAFQTQL---- 300
                           .|:|.|:.  .|.:..|   :|...|           |...:|||:    
 Frog   190 ---------------PWWSIQQA--TPVAHASTIPHPHHRFPIQRSLVLGHSDFAQYQTQIAALL 237

  Fly   301 --------QRRSVRCTCPNCTNEMSGLPPIVGPDERG-RKQHICHIPGCERLYGKASHLKTHLRW 356
                    .||..||.||||....       ||||.| :||||||||||.::|||.||||.||||
 Frog   238 QTKSPLATARRCRRCRCPNCQTSS-------GPDEAGKKKQHICHIPGCGKVYGKTSHLKAHLRW 295

  Fly   357 HTGERPFLC--LTCGKRFSRSDELQRHGRTHTNYRPYACPICSKKFSRSDHLSKHKKTHFKDKKS 419
            |:|||||:|  |.|||.|:||||||||.||||..:.:.||.|.|:|.|||||:||.||| ::||.
 Frog   296 HSGERPFICNWLFCGKSFTRSDELQRHLRTHTGEKRFVCPECGKRFMRSDHLAKHVKTH-QNKKI 359

  Fly   420 KKV 422
            |.|
 Frog   360 KSV 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368 13/18 (72%)
zf-H2C2_2 349..374 CDD:290200 19/26 (73%)
C2H2 Zn finger 365..385 CDD:275368 15/21 (71%)
zf-H2C2_2 377..402 CDD:290200 14/24 (58%)
zf-C2H2 391..413 CDD:278523 13/21 (62%)
C2H2 Zn finger 393..413 CDD:275368 13/19 (68%)
sp5NP_989092.1 C2H2 Zn finger 277..296 CDD:275368 13/18 (72%)
zf-C2H2 302..326 CDD:333835 16/23 (70%)
C2H2 Zn finger 304..326 CDD:275368 15/21 (71%)
zf-H2C2_2 318..341 CDD:372612 13/22 (59%)
zf-C2H2 332..354 CDD:333835 13/21 (62%)
C2H2 Zn finger 334..354 CDD:275368 13/19 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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