DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment btd and sp4

DIOPT Version :9

Sequence 1:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_956418.1 Gene:sp4 / 387291 ZFINID:ZDB-GENE-031202-3 Length:714 Species:Danio rerio


Alignment Length:441 Identity:146/441 - (33%)
Similarity:184/441 - (41%) Gaps:106/441 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QAQQQQHAQHQQHAQQQQHHLHMQQAQHHLHLSHQQAQQQHMQHLTQQQQQQQQQQQQQQQQQQQ 81
            |:..:|..|.||.  |...|..:||.|      .|..|||.:|...|.|..|..|..||..|.|.
Zfish   342 QSTSEQAGQIQQF--QIVGHPVLQQIQ------IQSPQQQVVQGSIQIQPGQTLQPVQQNLQLQA 398

  Fly    82 QQQPQQQQHDFLSAAALLSAPPSLSGSSSGSSSGSSPLYGKPPMKLELPYPQASSTGTASPNSSI 146
            .|.|.|          :|...|:|:.|...|...........|.:|.|. |.|||.|        
Zfish   399 FQNPAQ----------VLIRTPTLTPSGQISWQTVQVQNAGMPQQLTLA-PVASSAG-------- 444

  Fly   147 QSAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTSSSPSSSAASAAAA 211
                             ..:||.|           ||.|      |.|||.    :.|||...|.
Zfish   445 -----------------GGTFAQI-----------APLT------LGGSPI----TLSAAQLPAG 471

  Fly   212 AAAAAAAAADLGAAAVASAAYGWNTAYSGLGPARSQFPYAQYASDYYGNAVGMSSSAAWFSHQER 276
            :.......|.||||.|  ...|.....:|:...:......:..|......||..|:|.   ..|:
Zfish   472 SGVQTVNIAGLGAAGV--QVQGVPLTITGVQGQQQGQDGVKVQSAPVTVTVGNISNAV---SPEQ 531

  Fly   277 LYQPWSSQSYPGFNFDDIAFQTQLQRRSVRCTCPNCTNEMSGLPPIVGPDERGR--------KQH 333
            :.|..|.....|        |...:.|.|.|:||||.            |..||        |||
Zfish   532 MGQVQSPSDQEG--------QPSKRLRRVACSCPNCR------------DGEGRNNSDPSKKKQH 576

  Fly   334 ICHIPGCERLYGKASHLKTHLRWHTGERPFLC--LTCGKRFSRSDELQRHGRTHTNYRPYACPIC 396
            :||:.||.::|||.|||:.|||||||||||:|  :.|||||:||||||||.||||..:.:.||.|
Zfish   577 VCHMEGCGKVYGKTSHLRAHLRWHTGERPFVCNWIFCGKRFTRSDELQRHRRTHTGEKRFECPEC 641

  Fly   397 SKKFSRSDHLSKHKKTHFKDKKSKKVLAAEAKEQAAAAIKLEKKEKKSGKP 447
            ||:|.||||||||.||| ::||....|.....::..     |:.::..|.|
Zfish   642 SKRFMRSDHLSKHIKTH-QNKKGGAALTIITTDEME-----EEVDEVLGSP 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368 11/18 (61%)
zf-H2C2_2 349..374 CDD:290200 19/26 (73%)
C2H2 Zn finger 365..385 CDD:275368 15/21 (71%)
zf-H2C2_2 377..402 CDD:290200 15/24 (63%)
zf-C2H2 391..413 CDD:278523 15/21 (71%)
C2H2 Zn finger 393..413 CDD:275368 15/19 (79%)
sp4NP_956418.1 COG5048 <566..656 CDD:227381 56/89 (63%)
C2H2 Zn finger 578..600 CDD:275368 13/21 (62%)
zf-H2C2_2 592..619 CDD:290200 19/26 (73%)
C2H2 Zn finger 608..630 CDD:275368 15/21 (71%)
zf-H2C2_2 622..645 CDD:290200 14/22 (64%)
zf-C2H2 636..658 CDD:278523 15/21 (71%)
C2H2 Zn finger 638..658 CDD:275368 15/19 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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