DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment btd and Sp9

DIOPT Version :10

Sequence 1:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001178831.1 Gene:Sp9 / 366078 RGDID:1559457 Length:485 Species:Rattus norvegicus


Alignment Length:560 Identity:159/560 - (28%)
Similarity:208/560 - (37%) Gaps:203/560 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 GSSPLYGKPPMKLELPYPQASSTGTASPNSSIQSAPSSASVSPSIFPSPAQSFASISASPSTPTT 179
            |..|.:|..|  |.:.....:..|..||   :.:.|.|::.:...|....:|.:|.:...|....
  Rat     7 GEEPRFGTTP--LAMLAATCNKIGNTSP---LTTLPESSAFAKGGFHPWKRSSSSCNLGSSLSGF 66

  Fly   180 TLAPPTTAAAGALAG--------------SPTSSSPSSS-----AASAAAAAAAAAAA------- 218
            .:| .....:|:|||              |||||:.||.     :.|||||||||..:       
  Rat    67 AVA-TGGRGSGSLAGGSGAANSAFCLASTSPTSSAFSSDYGGLFSNSAAAAAAAAGVSPQEAGGQ 130

  Fly   219 ----------AAD-----------------------LGAAAVAS-AAYGWNTAYSGLG------- 242
                      |||                       |.|..|.: ||..|...:|..|       
  Rat   131 SAFISKVHTTAADGLYPRVGMAHPYESWYKSGFHSTLAAGEVTNGAASSWWDVHSSPGSWLEVQN 195

  Fly   243 PA-------RSQFPYAQ-------YASDYYG------NAVGMSSSAAWFSH-----QERLYQPWS 282
            ||       .|..|.|.       |..|:..      ::.|:.||||..||     |..|.|...
  Rat   196 PAGGLQSSLHSGAPQASLHSQLGTYNPDFSSLTHSAFSSTGLGSSAAAASHLLSTSQHLLAQDGF 260

  Fly   283 SQSYPGFNFDDIAFQTQL----------------QRRSVR-------CTCPNCTNEMSGLPPIVG 324
            ....|.::....|.....                ..||.|       |.|||| .|...|.| .|
  Rat   261 KPVLPSYSDSSAAVAAAAASAMISGAAAAAAGGSSARSARRYSGRATCDCPNC-QEAERLGP-AG 323

  Fly   325 PDERGRKQHICHIPGCERLYGKASHLKTHLRWHTGERPFLC--LTCGKRFSRSDELQRHGRTHTN 387
            ...|.:..|.||||||.::|||.||||.|||||||||||:|  |.|||||:||||||||.||||.
  Rat   324 ASLRRKGLHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTG 388

  Fly   388 YRPYACPICSKKFSRSDHLSKHKKTHFKDKKSKKVLAAEAKEQAAAAIKLEKKEKKSGKPLTPPV 452
            .:.:|||:|:|:|.||||||||.|||......||                               
  Rat   389 EKRFACPVCNKRFMRSDHLSKHIKTHNGGGGGKK------------------------------- 422

  Fly   453 EFKQEQPDTTPLVNYAPYANLYQHSTSAGSSVNPPPPPPPLFQQQMTTTTSSAAASFVEQPWSSS 517
                                        ||.                   |...||.:|.|.|.|
  Rat   423 ----------------------------GSD-------------------SDTDASNLETPRSES 440

  Fly   518 SSRAIQPATTSASSSSSSSASSPAAAVVSAIGSASSPAAS 557
            ....:..:..||:.:::::|::.|||..:|..:....||:
  Rat   441 PDLILHDSGVSAARAAAAAAAAAAAAAAAAASAGGKEAAT 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368 13/18 (72%)
zf-H2C2_2 349..374 CDD:463886 21/26 (81%)
C2H2 Zn finger 365..385 CDD:275368 16/21 (76%)
zf-H2C2_2 377..402 CDD:463886 15/24 (63%)
zf-C2H2 391..413 CDD:395048 15/21 (71%)
C2H2 Zn finger 393..413 CDD:275368 14/19 (74%)
Sp9NP_001178831.1 SP9_N 19..333 CDD:411695 73/319 (23%)
C2H2 Zn finger 337..356 CDD:275368 13/18 (72%)
zf-H2C2_2 348..375 CDD:463886 21/26 (81%)
C2H2 Zn finger 364..386 CDD:275368 16/21 (76%)
zf-H2C2_2 378..401 CDD:463886 14/22 (64%)
zf-C2H2 392..414 CDD:395048 15/21 (71%)
C2H2 Zn finger 394..414 CDD:275368 14/19 (74%)

Return to query results.
Submit another query.