DRSC/TRiP Functional Genomics Resources

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Protein Alignment btd and Sp6

DIOPT Version :10

Sequence 1:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001102303.1 Gene:Sp6 / 363672 RGDID:1306768 Length:376 Species:Rattus norvegicus


Alignment Length:411 Identity:127/411 - (30%)
Similarity:166/411 - (40%) Gaps:130/411 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 SAPPSLS----GSSSGSSSGSSPLYGKP---------PMKLELPYPQASSTGTASPNSSIQSAPS 151
            |:||.|.    .:..|.:|..:..|..|         |:..|:.:.|......||...:.:...|
  Rat    19 SSPPRLDLQPLQTYQGHTSPEAGDYPSPLQPGELQSLPLGPEVDFSQGYELPGASSRVTCEDLES 83

  Fly   152 SASVSPSIF-----PSPAQSFASISASPSTPTT------TLAP-------PTTAAAGALAGSPTS 198
            .:.::|..|     |..:..:.| ...|:.|.|      .|.|       |.|..|....|.|.:
  Rat    84 DSPLAPGPFSKLLQPDMSHHYES-WFRPTHPGTEDGSWWDLHPGTSWMDLPHTQGALTSPGHPGA 147

  Fly   199 SSPSSSAASAAAAAAA-----------AAAAAADL-----GAAAVASAAYGWNTAYSGLGPARSQ 247
            ..|:...........|           .||....|     ||..:.:||                
  Rat   148 LQPALGGYVGDHQLCAPPPHPHPHHLLPAAGGQHLLGPPDGAKVLEAAA---------------- 196

  Fly   248 FPYAQYASDYYGNAVGMSSSAAWFSHQERLYQPWSSQSYPGFNFDDIAFQTQLQRRSVR------ 306
             |.:|          |:.||.                        |.|.:.:..||||.      
  Rat   197 -PESQ----------GLDSSL------------------------DAAARPKGSRRSVPRSSGQT 226

  Fly   307 -CTCPNCTN-EMSGLPPIVGPDERGRKQHI--CHIPGCERLYGKASHLKTHLRWHTGERPFLC-- 365
             |.||||.. |..|.|  .||| .|:|:|:  ||||||.:.|.|.||||.|||||:|:|||:|  
  Rat   227 VCRCPNCLEAERLGAP--CGPD-GGKKKHLHNCHIPGCGKAYAKTSHLKAHLRWHSGDRPFVCNW 288

  Fly   366 LTCGKRFSRSDELQRHGRTHTNYRPYACPICSKKFSRSDHLSKHKKTHFKDKKSKKVLAAEAKEQ 430
            |.|||||:||||||||.:|||..:.:.|.:||:.|.|||||:||.|||           ..|||:
  Rat   289 LFCGKRFTRSDELQRHLQTHTGTKKFPCAVCSRVFMRSDHLAKHMKTH-----------EGAKEE 342

  Fly   431 AAAAIKLEKK-----EKKSGK 446
            ||||.:.|.|     |...||
  Rat   343 AAAAAQGEGKAGGVVESPGGK 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368 12/18 (67%)
zf-H2C2_2 349..374 CDD:463886 19/26 (73%)
C2H2 Zn finger 365..385 CDD:275368 15/21 (71%)
zf-H2C2_2 377..402 CDD:463886 12/24 (50%)
zf-C2H2 391..413 CDD:395048 12/21 (57%)
C2H2 Zn finger 393..413 CDD:275368 12/19 (63%)
Sp6NP_001102303.1 SP6_N 1..255 CDD:411693 62/290 (21%)
C2H2 Zn finger 259..278 CDD:275368 12/18 (67%)
COG5048 <261..>336 CDD:227381 46/74 (62%)
C2H2 Zn finger 286..308 CDD:275368 15/21 (71%)
C2H2 Zn finger 316..336 CDD:275368 12/19 (63%)

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