DRSC/TRiP Functional Genomics Resources

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Protein Alignment btd and sp3b

DIOPT Version :10

Sequence 1:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_005165855.1 Gene:sp3b / 322961 ZFINID:ZDB-GENE-110815-3 Length:783 Species:Danio rerio


Alignment Length:672 Identity:163/672 - (24%)
Similarity:224/672 - (33%) Gaps:255/672 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DAACNYLNPYAQQHQAQQQQHAQHQQHAQQ--QQHHLHMQQAQ---------HHLHLS------H 50
            ||....|:|     :..|.|.:.|:...:.  |...|:.|..|         |.|.|.      .
Zfish    80 DAVPTILDP-----KVMQPQRSSHKTSREMGCQTEELNTQDGQCQTFPDLKPHTLKLEPRSETPE 139

  Fly    51 QQAQQQHMQHLTQQQQQQQQQQQQQQQQQQQ-------QQQPQQQQHDFLSAAALLSAPPSLSGS 108
            |.|:||.|..|.....|....|.....|.||       |......:.:.|:..:.:...|::...
Zfish   140 QPAKQQEMAALDVDSSQSDFLQPASGAQDQQTTDLTAIQMTGSSDRWEVLTPVSSVKGEPAVVHV 204

  Fly   109 SSGSSSGSSPLYGKPPMKL----ELPYPQASSTGTASPNSSIQSAP------------------- 150
            .||...||:..|..|...:    :..:..|...||.:.....|..|                   
Zfish   205 PSGGLLGSNGQYVVPLQTMAGQTQPVFVTAGVDGTGANGVQYQVIPQLQGADGASLSYTASAADG 269

  Fly   151 SSASVSPSIFPSPAQSFAS----------ISAS---PSTPTTTLA-------------------- 182
            |:.....:|.|...|..|:          :|.|   ...||.:||                    
Zfish   270 STLGTDIAILPDGTQGIATATNANDLQGLLSQSGHVQQIPTVSLAGSGFGTQGQVVANMGLPGNI 334

  Fly   183 --------------------------------------PPTTAA-----------------AGAL 192
                                                  |.||.:                 |.|.
Zfish   335 TLVPINSLSNVDLESLGLAGAQTIATSVTADGQLIMTGPTTTTSDNQGESGKCTESLNANDANAN 399

  Fly   193 AGSPTSSSPSSSA-------------ASAAAA------------------------AAAAAAAAA 220
            |..||::|.:|::             |:|.:|                        |..|..||.
Zfish   400 AFVPTTTSSTSTSLPETIDGTGVLTQATAVSAGHQDLSYIQQNHTTGGEQVVQLLPAQTADGAAQ 464

  Fly   221 DLGAAAVASAA--------------YGWNT----------------------------------- 236
            .|.:..:.:|.              ..|.|                                   
Zfish   465 TLQSVQLLNAGTFLIQAQTVSPTGQIQWQTFQVQGVQNLQNLQLPAAGGVSSPQITLAPVQTLSL 529

  Fly   237 AYSGLGPARSQFPYAQYASDYYGNAVGM-SSSAAWFSHQE-RLYQPWSSQSYPG--FNFDDIAF- 296
            ..||...|..|.|..|..:   .|:||. .......||.: ::.:...|..:|.  .:..|:|. 
Zfish   530 GQSGTTGALGQIPNLQTVT---VNSVGQYQQDENTESHTDIQIKEEPESDDWPNSTLSTSDLAHL 591

  Fly   297 -------------QTQLQRRSVRCTCPNCTNEMSGLPPIVGPDERGRKQHICHIPGCERLYGKAS 348
                         |...:.|.|.|||||| .|..|....:|.    :||||||||||.::|||.|
Zfish   592 RVRLVEEDMEGTGQEGKRLRRVACTCPNC-KEAGGRGSSMGK----KKQHICHIPGCGKVYGKTS 651

  Fly   349 HLKTHLRWHTGERPFLC--LTCGKRFSRSDELQRHGRTHTNYRPYACPICSKKFSRSDHLSKHKK 411
            ||:.|||||:|||||:|  ..|||||:||||||||.||||..:.:.||.|||:|.|||||:||.|
Zfish   652 HLRAHLRWHSGERPFICSWSYCGKRFTRSDELQRHRRTHTGEKKFVCPECSKRFMRSDHLAKHIK 716

  Fly   412 THFKDKKSKKVLAAEAKEQAAA 433
            || ::||.........:.:|||
Zfish   717 TH-QNKKGLNSNTGVGQTEAAA 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368 12/18 (67%)
zf-H2C2_2 349..374 CDD:463886 18/26 (69%)
C2H2 Zn finger 365..385 CDD:275368 15/21 (71%)
zf-H2C2_2 377..402 CDD:463886 15/24 (63%)
zf-C2H2 391..413 CDD:395048 14/21 (67%)
C2H2 Zn finger 393..413 CDD:275368 14/19 (74%)
sp3bXP_005165855.1 THAP 9..85 CDD:461662 2/4 (50%)
SP1-4_N 136..637 CDD:425404 86/508 (17%)
zf-C2H2 636..660 CDD:395048 17/23 (74%)
C2H2 Zn finger 638..660 CDD:275368 15/21 (71%)
COG5048 <651..728 CDD:227381 49/77 (64%)
C2H2 Zn finger 668..690 CDD:275368 15/21 (71%)
zf-H2C2_2 682..705 CDD:463886 14/22 (64%)
C2H2 Zn finger 698..718 CDD:275368 14/19 (74%)

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