DRSC/TRiP Functional Genomics Resources

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Protein Alignment btd and Sp1

DIOPT Version :9

Sequence 1:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_036787.2 Gene:Sp1 / 24790 RGDID:3738 Length:786 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368
zf-H2C2_2 349..374 CDD:290200
C2H2 Zn finger 365..385 CDD:275368
zf-H2C2_2 377..402 CDD:290200
zf-C2H2 391..413 CDD:278523
C2H2 Zn finger 393..413 CDD:275368
Sp1NP_036787.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..94
Repressor domain. /evidence=ECO:0000250 2..83
SP1-4_N 55..628 CDD:425404
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..143
Transactivation domain A (Gln-rich). /evidence=ECO:0000250 147..252
Transactivation domain B (Gln-rich). /evidence=ECO:0000250 262..496
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..303
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 332..397
9aaTAD. /evidence=ECO:0000250|UniProtKB:P08047 463..471
Transactivation domain C (highly charged). /evidence=ECO:0000250 497..611
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 562..600
VZV IE62-binding. /evidence=ECO:0000250 620..786
zf-C2H2 627..651 CDD:395048
C2H2 Zn finger 629..651 CDD:275368
zf-H2C2_2 643..670 CDD:404364
C2H2 Zn finger 659..681 CDD:275368
zf-H2C2_2 673..696 CDD:404364
zf-C2H2 687..709 CDD:395048
C2H2 Zn finger 689..709 CDD:275368
Domain D. /evidence=ECO:0000250 709..786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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