DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment btd and Sp4

DIOPT Version :9

Sequence 1:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_033265.4 Gene:Sp4 / 20688 MGIID:107595 Length:782 Species:Mus musculus


Alignment Length:486 Identity:157/486 - (32%)
Similarity:212/486 - (43%) Gaps:105/486 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PYAQQHQAQQQQHAQHQ--QHAQQQQHHLH---------MQQAQHHLHLSHQQAQQQHMQHLTQQ 64
            |.|.:.:||.....|..  |:||.|.:.|.         :||.|      .||.|||.:|.:..|
Mouse   363 PAATESEAQSSSQLQSNGIQNAQDQSNSLQQVQIVGQPILQQIQ------IQQPQQQIIQAIPPQ 421

  Fly    65 QQQQQQQQQQQQQQQQQQQQPQQQQHDFLSAAALLSAPPSLSGSSSGSSSGSSPLYGKPPMKLEL 129
            ..|.|..|..|..|||..|..|.|.   ::...:|...|:|  :.||..|..:         :::
Mouse   422 SFQLQSGQTIQTIQQQPLQNVQLQA---VNPTQVLIRAPTL--TPSGQISWQT---------VQV 472

  Fly   130 PYPQASSTGTASPNSSIQSAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAG 194
            ...|:.|      |..:|:|..|..:  :|.|        :|:|..|....:||.      |:||
Mouse   473 QNIQSLS------NLQVQNAGLSQQL--TITP--------VSSSGGTTLAQIAPV------AVAG 515

  Fly   195 SPTSSSPSSSAASAAAAAAAAAAAAADLGAAAV--------ASAAYGWNTAYSGLGPARSQFPYA 251
            :|.    :.:.|..|:.......:.|:||||.|        .::..|......|:...::.....
Mouse   516 API----TLNTAQLASVPNLQTVSVANLGAAGVQVQGVPVTITSVAGQQQGQDGVKVQQATIAPV 576

  Fly   252 QYASDYYGNA-VGMSSSAAWFSHQERLYQPWSSQSYPGFNFDDIAFQTQLQRRSVRCTCPNCTNE 315
            ..|.....|| :|..|       .::|.|....|   |....|...|...:.|.|.|:|||| .|
Mouse   577 TVAVGGIANATIGAVS-------PDQLTQVHLQQ---GQQTSDAEVQPGKRLRRVACSCPNC-RE 630

  Fly   316 MSGLPPIVGPDERG-RKQHICHIPGCERLYGKASHLKTHLRWHTGERPFLC--LTCGKRFSRSDE 377
            ..|.    |..|.| :|||:|||.||.::|||.|||:.|||||||||||:|  :.|||||:||||
Mouse   631 GEGR----GSSEPGKKKQHVCHIEGCGKVYGKTSHLRAHLRWHTGERPFICNWMFCGKRFTRSDE 691

  Fly   378 LQRHGRTHTNYRPYACPICSKKFSRSDHLSKHKKTHFKDKKSKKVLAAEAKEQ------------ 430
            ||||.||||..:.:.||.|||:|.||||||||.|||...|.....||.....:            
Mouse   692 LQRHRRTHTGEKRFECPECSKRFMRSDHLSKHVKTHQNKKGGGTALAIVTSGELDSSVTEVLGSP 756

  Fly   431 ---AAAAIKLEKKEKKSGKPLTPPVEFKQEQ 458
               ..|||      .:...|.||.|....|:
Mouse   757 RIVTVAAI------SQDSNPATPNVSTNMEE 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368 11/18 (61%)
zf-H2C2_2 349..374 CDD:290200 19/26 (73%)
C2H2 Zn finger 365..385 CDD:275368 15/21 (71%)
zf-H2C2_2 377..402 CDD:290200 15/24 (63%)
zf-C2H2 391..413 CDD:278523 15/21 (71%)
C2H2 Zn finger 393..413 CDD:275368 15/19 (79%)
Sp4NP_033265.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 107..148
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..385 6/21 (29%)
9aaTAD, inactive. /evidence=ECO:0000250|UniProtKB:Q02446 465..473 1/16 (6%)
C2H2 Zn finger 647..669 CDD:275368 14/21 (67%)
COG5048 <660..731 CDD:227381 49/70 (70%)
zf-H2C2_2 661..688 CDD:290200 19/26 (73%)
C2H2 Zn finger 677..699 CDD:275368 15/21 (71%)
zf-H2C2_2 691..714 CDD:290200 14/22 (64%)
zf-C2H2 705..727 CDD:278523 15/21 (71%)
C2H2 Zn finger 707..727 CDD:275368 15/19 (79%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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