DRSC/TRiP Functional Genomics Resources

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Protein Alignment TAAR6 and npr-22

DIOPT Version :9

Sequence 1:NP_778237.1 Gene:TAAR6 / 319100 HGNCID:20978 Length:345 Species:Homo sapiens
Sequence 2:NP_001023541.1 Gene:npr-22 / 190424 WormBaseID:WBGene00022004 Length:434 Species:Caenorhabditis elegans


Alignment Length:331 Identity:80/331 - (24%)
Similarity:139/331 - (41%) Gaps:69/331 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    28 SPGSRVILYIVFGFGAVLAVFGNLLVMISILHFKQLHSPTNFLVASLACADFLVGVTVMPFSMVR 92
            :|..:::..:.:....|..|:||:||::.|::||:|.:.||.|:.:||.||.|:.|..:|||..:
 Worm    46 TPSMKMLCILFYSILCVCCVYGNVLVILVIVYFKRLRTATNILILNLAVADLLISVFCIPFSYWQ 110

Human    93 TV---ESCWYFGRSFCTFHTCCDVAFCYSSLFHLCFISIDRYIAVTDPLVYPTKFTVSVSGICIS 154
            .:   :..|.||...|:..........:.|.:.|..||.||::|:...|....:.|...:...::
 Worm   111 VLIYDDQRWLFGSMMCSLLAFLQAMAVFLSAWTLVVISFDRWMAIMFLLTPNIRITRRRALYLVA 175

Human   155 VSWI------LPLMYSGAVFYTGVYDDGLEELSDALNCIGGCQTVVNQNWV-------------- 199
            .:||      |||:::...|..   .|||.      ||        .:||.              
 Worm   176 ATWIFSILMALPLLFTTRFFED---QDGLP------NC--------GENWTYFGDSGEQVRKVYS 223

Human   200 -LTDFLSFFIPTFIMIILYGNIFLVARRQAKKIENTGSKTESSSESYKARVARRE--RKAAKTLG 261
             :...|.:.:|..::||.|.:|.:       |:.|:......:..:.|..|.|.|  :|....:.
 Worm   224 SMVLILQYVVPQAVLIITYTHIGI-------KMWNSRVPGMQNGATKKMIVDRHESVKKLVPMVI 281

Human   262 VTVVAFMISWLPYSIDSLIDAFMGFITPACIYEICCW------------CAYYNSAMNPLIYALF 314
            :....|.:.|||..|  ||:     :.|....:|..|            .|..:|.:||:||.:.
 Worm   282 LISALFALCWLPLLI--LIN-----VIPEFYPDINSWGYILYLWWFAHGLAMSHSMVNPIIYFIR 339

Human   315 YPWFRK 320
            ...||:
 Worm   340 NARFRE 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TAAR6NP_778237.1 7tm_4 43..>271 CDD:304433 62/253 (25%)
7tm_1 49..311 CDD:278431 73/299 (24%)
npr-22NP_001023541.1 7tmA_PR4-like 51..347 CDD:320514 79/326 (24%)
TM helix 1 52..78 CDD:320514 7/25 (28%)
TM helix 2 85..110 CDD:320514 12/24 (50%)
TM helix 3 126..156 CDD:320514 8/29 (28%)
TM helix 4 169..190 CDD:320514 5/20 (25%)
TM helix 5 219..248 CDD:320514 6/35 (17%)
TM helix 6 271..301 CDD:320514 9/36 (25%)
TM helix 7 315..340 CDD:320514 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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