DRSC/TRiP Functional Genomics Resources

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Protein Alignment TAAR6 and ser-5

DIOPT Version :9

Sequence 1:NP_778237.1 Gene:TAAR6 / 319100 HGNCID:20978 Length:345 Species:Homo sapiens
Sequence 2:NP_492273.2 Gene:ser-5 / 184572 WormBaseID:WBGene00008890 Length:454 Species:Caenorhabditis elegans


Alignment Length:339 Identity:106/339 - (31%)
Similarity:149/339 - (43%) Gaps:67/339 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    29 PGSRVILYIVFGFGAVLAVFGNLLVMISILHFKQLHSPTN--FLVASLACADFLVGVTVMPFSMV 91
            |...|:|.|......:|.:||||||    |.||.....||  .||.:|...||||||.|:|...|
 Worm    59 PAVLVLLCIPAVIIILLTIFGNLLV----LFFKARVGRTNTTLLVWNLGLTDFLVGVIVLPMGAV 119

Human    92 RTVESCWYFGRSFCTFHTCCDVAFCYSSLFHLCFISIDRYIAVTDPLVYPTKFTVSVSGICISVS 156
            ..:...|.|||..|......||.||..|:..:|.||:|||:|||.||.|.:..|.:.....:::.
 Worm   120 YLIYRKWIFGRFLCRLWVAADVTFCTCSVVTICVISVDRYLAVTRPLRYKSIVTKTKVISVMTII 184

Human   157 WILPLMYSGAVFYTGV-------YDDGLEELSDALNCIGG------CQTVVNQNWVLTDFLSFFI 208
            ||    :|.::..|.|       |||.|        |..|      ..:||         .:||:
 Worm   185 WI----FSSSILLTTVRWEQPECYDDSL--------CFVGNEIRHLAHSVV---------FAFFL 228

Human   209 PTFIMIILYGNIFLVARRQAKKIE---------------NTGS----------KTESSSESYKAR 248
            |..:.:.||..|:.:||.:.|.::               ||.|          ||....| ::.|
 Worm   229 PASVTLTLYWRIYKLARNRQKALDRGFLMILGSNMNFLTNTLSQQTTLRVHFGKTNGMVE-HQRR 292

Human   249 VARRERKAAKTLGVTVVAFMISWLPYSIDSLIDAFMGFITPACIYEICCWCAYYNSAMNPLIYAL 313
            |.|...:.||||||...:|:..|||:....|.:.......|....::..|..|.||.:||:||:.
 Worm   293 VLRTHERIAKTLGVVSCSFLFCWLPFFGLYLTNYKCSGCVPPIAIDVASWLGYCNSMLNPIIYSF 357

Human   314 FYPWF-RKAIKVIV 326
            ....| |.|.:::|
 Worm   358 TVKEFKRSAFRLVV 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TAAR6NP_778237.1 7tm_4 43..>271 CDD:304433 85/267 (32%)
7tm_1 49..311 CDD:278431 94/301 (31%)
ser-5NP_492273.2 7tmA_amine_R-like 64..365 CDD:320098 101/326 (31%)
TM helix 1 65..87 CDD:320098 10/25 (40%)
TM helix 2 96..118 CDD:320098 11/21 (52%)
TM helix 3 134..156 CDD:320098 7/21 (33%)
TM helix 4 179..195 CDD:320098 3/19 (16%)
TM helix 5 215..238 CDD:320098 6/31 (19%)
TM helix 6 298..323 CDD:320098 10/24 (42%)
TM helix 7 334..359 CDD:320098 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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