DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg2 and PATL1

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_177360.1 Gene:PATL1 / 843546 AraportID:AT1G72150 Length:573 Species:Arabidopsis thaliana


Alignment Length:432 Identity:72/432 - (16%)
Similarity:132/432 - (30%) Gaps:160/432 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 TSPSTSSSSASST-------QNLIAVVPPQLQQLQVQLPAPGGGGGAGAGGGGGGGGGAAPVRRH 117
            |:...||:....|       :::::|.||:                          ...|||   
plant   189 TTEKASSAEEDGTKTVEAIEESIVSVSPPE--------------------------SAVAPV--- 224

  Fly   118 ISHTTAV-----------------------------KFLYARKFDIPRAVSLYEQHEQIRLKEYL 153
            :..|.||                             |||.||.|.:..|:::.:...|.|.:.  
plant   225 VVETVAVAEAEPVEPEEVSIWGVPLLQDERSDVILTKFLRARDFKVKEALTMLKNTVQWRKEN-- 287

  Fly   154 YNIDPDVEPLRSELQTGKFTILPARTSSGAAIALFTANRHSPLSVSHTTTLQG--IVYQLDSALQ 216
             .||..||                   ||..::.|     ..:..:|....:|  ::|......|
plant   288 -KIDELVE-------------------SGEEVSEF-----EKMVFAHGVDKEGHVVIYSSYGEFQ 327

  Fly   217 DSE-------------------------------TQRAGLVFIYDMSGS----KYSNFDYDLSQK 246
            :.|                               ..::..||:.|...:    |.:.:.:  .::
plant   328 NKELFSDKEKLNKFLSWRIQLQEKCVRAIDFSNPEAKSSFVFVSDFRNAPGLGKRALWQF--IRR 390

  Fly   247 ILTLLKGGYPARLKKVLIVTAPLWFKAPFKIL-RLFVREKLRERVF----TVSVPQLALHVPRKA 306
            .:...:..||....|.|.:..|.|:...:|.. .:....:.|.::.    :.|...:..::..:.
plant   391 AVKQFEDNYPEFAAKELFINVPWWYIPYYKTFGSIITSPRTRSKMVLAGPSKSADTIFKYIAPEQ 455

  Fly   307 LPIHLGGTLEVDHATWLLSCRQSMTNREDELLANIVGVGGGSGSGSAAGSAAIVS---------- 361
            :|:..||          ||....:|  |:.:...||...........|..|..:|          
plant   456 VPVKYGG----------LSKDTPLT--EETITEAIVKPAANYTIELPASEACTLSWELRVLGADV 508

  Fly   362 TNGTETEAAT--TAATIISAVHQLGDNNTTVVTVSNGVGPAG 401
            :.|.:.|..|  :.|.|:|...::|..:..|:|.|..||..|
plant   509 SYGAQFEPTTEGSYAVIVSKTRKIGSTDEPVITDSFKVGEPG 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024 11/58 (19%)
SEC14 170..314 CDD:469559 23/185 (12%)
PTPc-N9 529..799 CDD:350391
PATL1NP_177360.1 CRAL_TRIO_N <247..280 CDD:215024 7/32 (22%)
SEC14 310..465 CDD:214706 21/166 (13%)
Blue background indicates that the domain is not in the aligned region.

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