DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg2 and ptpn13

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:XP_068072003.1 Gene:ptpn13 / 560883 ZFINID:ZDB-GENE-070410-72 Length:2525 Species:Danio rerio


Alignment Length:622 Identity:159/622 - (25%)
Similarity:256/622 - (41%) Gaps:144/622 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 RVFTVSVPQLALHVPRKALPIH--------LGGTLEVDHATWLLSCRQSMTNREDELLANIVGV- 344
            |:..:|:..|:|...|...|:.        |...:....:..:.....|..|.|.|.|:.|... 
Zfish  1926 RLLQLSLRNLSLKATRDGKPVFPDEEEISLLNNNISPKVSQSMNGYLHSSENNELEALSGICPAE 1990

  Fly   345 ------------GGGSGSGSAAGSAAIVSTNGTETEAATTAATIISAVHQLGD-----NNTTVVT 392
                        .||.|.....|...|...:.|....|..|.|:     |:||     |:..::.
Zfish  1991 EQIVKLELEKPPAGGLGFSVIGGERGIFVKSVTPGGTADIAGTL-----QVGDRLLKVNDDLMIG 2050

  Fly   393 VSN--GVGPAGSASGGATTAASAATE----------PNENITINGLSPSHRQAANN--------- 436
            ||:  .|.....|.|......|...:          |.::.|:||         ||         
Zfish  2051 VSHAKAVTTIRKAKGLVQLIVSRPPDQMPNTYLGFLPLKSSTVNG---------NNDVSEDSGVK 2106

  Fly   437 ------SSSSSSSAATVANPLKLNTSG-----SADNNSTITNATTAAGAAGAAAGTTTNGGGEFW 490
                  |..|.||:.....|:..:|..     ..|.::.::..|...|::.......|:...|:.
Zfish  2107 TKLQTPSEQSQSSSPPPLPPIDYDTGSLEKRKGTDTSADLSEDTDCDGSSLPEDSPETSRKAEWK 2171

  Fly   491 SEN--------PPSSASSGFSDDDSLAGQEGDPKPIDQI------------------VQMVK--- 526
            .||        .|.|:|....:|:...|  .|..||:.|                  :.:||   
Zfish  2172 EENVDAPLNDSAPQSSSGPLDEDEITWG--SDDLPIENINSKFTEDGPIVTEEELTSLPLVKVVP 2234

  Fly   527 ------------QRGRHGLI------KEYADIRNRAPEGTFLHARMRANLTKNRYTDVLCYDHSR 573
                        .|...|||      :|:.:::|..|....|..:.:.|..||||.:::.:|.:|
Zfish  2235 DGHYTSTNLNTIVRMMRGLIEQKVPLQEFENLQNLRPLDECLIGQTKENKKKNRYKNIVPFDTTR 2299

  Fly   574 VVLAHEDGDEPSDYINANFVD-GYKQKN-AYISTQGPLPKTSQDFWRMIWEQHCLVIVMTTRVME 636
            |:|.::.|     ||||||:. ..|.:: .||:.|||||.|..|||:|:|||...||.|.|:.:|
Zfish  2300 VLLGNDGG-----YINANFIKMAVKDESFMYIACQGPLPTTLGDFWQMVWEQKSNVIAMMTQEVE 2359

  Fly   637 RGRVKCGQYWEPTEESSLEFGD-YHVRTISVECNEDYMVASLELRNIKTDEIRNVSHWQFTSWPD 700
            .|:|||.:||..|..|.....| ..|..:..:..:::::..:||::::|:|::.|:|..:|.|||
Zfish  2360 GGKVKCQRYWPDTPRSPQMVDDRLQVTLVKDQHLDNFVIRLIELKDVQTNELQRVTHLNYTGWPD 2424

  Fly   701 YGVPSSAMAMLNFLQKVREKQAQLVQGLGDTWAGHPRGPPIVVHCSAGIGRTGTFITLDICISRL 765
            :|.|:....:|.|:..:|..              |..| ||:.||||||||:||.|.:|:.:..:
Zfish  2425 HGTPTQPEQLLTFISYMRHI--------------HLSG-PIITHCSAGIGRSGTLICIDVVLGLI 2474

  Fly   766 EDVGTADIRGTVEKIRSQRAYSIQMPDQYVFCHLALI 802
            ......||...|..:|.||...:|..:||:||:..::
Zfish  2475 SKDADFDISDIVRTMRLQRQGMVQTEEQYIFCYQVIL 2511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024
SEC14 170..314 CDD:469559 7/32 (22%)
PTPc-N9 529..799 CDD:350391 96/278 (35%)
ptpn13XP_068072003.1 Protein Kinases, catalytic domain 48..225 CDD:473864
Ubl1_cv_Nsp3_N-like 600..694 CDD:475130
B41 605..809 CDD:214604
FERM_C_PTPH13 805..905 CDD:270008
PDZ1_PTPN13-like 1102..1193 CDD:467285
PTN13_u3 1189..1366 CDD:465189
PDZ2-PTPN13_FRMPD2-like 1364..1455 CDD:467254
PDZ3_PTPN13_FRMPD2-like 1498..1587 CDD:467181
PDZ4_PTPN13-like 1762..1845 CDD:467182
PDZ5_PTPN13-like 1856..1942 CDD:467183 4/15 (27%)
PDZ5_DrPTPN13-like 1995..2072 CDD:467273 18/81 (22%)
PTPc-N13 2281..2514 CDD:350445 89/251 (35%)
Blue background indicates that the domain is not in the aligned region.

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