DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg2 and Ptpn13

DIOPT Version :10

Sequence 1:NP_572576.1 Gene:Ptpmeg2 / 31907 FlyBaseID:FBgn0028341 Length:827 Species:Drosophila melanogaster
Sequence 2:XP_038948202.1 Gene:Ptpn13 / 498331 RGDID:1563360 Length:2465 Species:Rattus norvegicus


Alignment Length:835 Identity:197/835 - (23%)
Similarity:304/835 - (36%) Gaps:244/835 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 FDIPRAVSLYEQHEQIRLKEYLYNIDPDVEPLRSELQTGKFTILPAR----TSSGAAIALFTANR 192
            |.:||.:....:.|..||...|     ||.|       |:....||.    .|.|..:....:..
  Rat  1692 FYLPRKIPGKPESESSRLPHPL-----DVSP-------GQIRQPPAECAPSDSPGKHLTHLASQL 1744

  Fly   193 HSPLSVSHTTTLQGIVYQLDSALQDSE-----------TQRAGLVFIYDMSGSKYSNFDYDLSQK 246
            |..   .:.|.|:.   .|.:.|:|||           :::..|.|...........:.:|:.|.
  Rat  1745 HKE---ENMTALKN---DLGNHLEDSELEVELLITLVKSEKGSLGFTVTKGSQSIGCYVHDVIQD 1803

  Fly   247 ILTLLKGGYPA----------RLKKV---------------LIVTAPLWFKAPFKILRLFVREKL 286
                     ||          ||.||               |:..||       |.:||.:...|
  Rat  1804 ---------PAKGDGRLRPGDRLVKVNDADVTNMTHTDAVNLLRAAP-------KTVRLVIGRIL 1852

  Fly   287 ---RERVFTVSVPQLALHVPRKALPIHLGGTLEVDHATWLLS-----------CRQSMTNREDEL 337
               |..||...:|.:.:....:.|...|.|.....|....:|           |..       :|
  Rat  1853 ELPRMPVFPHLLPDITVTCHGEELGFSLSGGRGSPHGVVYISDINPRSAAAVDCSL-------QL 1910

  Fly   338 LANIVGVGGGSGSGSAAGSAAIVSTNGTETEAATTAATI------------------------IS 378
            |..|..|.|             |||:|...|.|..|..:                        ||
  Rat  1911 LDIIHYVNG-------------VSTHGMTLEEANRALDLSLPSVVLKVTRDGCPVVPCSTRSAIS 1962

  Fly   379 AVHQLGDNNTTVV--------------TVSNGVGPAGSASGGATTAAS----------------- 412
            |:..|..|..:.:              :..||.|.:|:...|....:|                 
  Rat  1963 ALRPLEANGLSSMEPYGQPALTPKKSFSKVNGDGASGAMCPGGKGLSSPRKKSADLMEARDFSFQ 2027

  Fly   413 --------AATEPNENITINGLSPSHRQAANN--SSSSSSSAATVANPLKLNTSGSADNNSTITN 467
                    ...:|.|...|..|.....:.|.|  :.:.:|..|...:||:.|...|.|...|..:
  Rat  2028 ESDSRDDDVYDDPQEAEVIQSLLDVVDEEAQNLLNQTKASRRACSPDPLRTNGEASEDGEDTDCD 2092

  Fly   468 ATTAAGAAGAAAGTTTNGGG--------------------EFWSENPPSSASSGFSDDDS----- 507
            .:...    .....:.||||                    |...|:..|:..:...:|.|     
  Rat  2093 GSPLP----EDVPESVNGGGGKACFASLIQASQEEKPVKEEATQESRESTTETTDREDSSKDPLF 2153

  Fly   508 LAGQEGDPKPIDQIVQMVKQRGR---------HGLI------KEYADIRNRAPEGTFLHARMRAN 557
            |..:|....|:.::....|..|.         .||:      ||..:::...|....|..:.:.|
  Rat  2154 LTNEELAALPVVRVPPSGKYTGTQLQATIRTLQGLLDQGIPSKELENLQELKPLDQCLIGQTKEN 2218

  Fly   558 LTKNRYTDVLCYDHSRVVLAHEDGDEPSDYINANFVD---GYKQKNAYISTQGPLPKTSQDFWRM 619
            ..||||.::|.||.:||.|..|.|     ||||:|:.   | .|:..||:.|||||.|..|||:|
  Rat  2219 RRKNRYKNILPYDTTRVPLGDEGG-----YINASFIRIPVG-TQEFVYIACQGPLPTTVGDFWQM 2277

  Fly   620 IWEQHCLVIVMTTRVMERGRVKCGQYWEPTEESSLEFGDYHVR--TISVECNEDYMVASLELRNI 682
            :|||:..||.|.|:.:|..::||.:|| |:...:....:..:|  .:.::..:.::|..:.|.:|
  Rat  2278 VWEQNSTVIAMMTQEVEGEKIKCQRYW-PSILGTTTMANERLRLALLRMQQLKGFVVRVMALEDI 2341

  Fly   683 KTDEIRNVSHWQFTSWPDYGVPSSAMAMLNFLQKVREKQAQLVQGLGDTWAGHPRGPPIVVHCSA 747
            :|.|:|::||..||:|||:..||....:|.|:..:|..:               |..|::.||||
  Rat  2342 QTGEVRHISHLNFTAWPDHDTPSHPEDLLTFISYMRHIR---------------RSGPVITHCSA 2391

  Fly   748 GIGRTGTFITLDICISRLEDVGTADIRGTVEKIRSQRAYSIQMPDQYVFCHLALI 802
            ||||:||.|.:|:.:..:......||...|..:|.||...:|...|||||:..::
  Rat  2392 GIGRSGTLICIDVVLGLISQDLEFDISDLVRCMRLQRHGMVQTEGQYVFCYQVVL 2446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpmeg2NP_572576.1 CRAL_TRIO_N <114..144 CDD:215024 3/11 (27%)
SEC14 170..314 CDD:469559 36/186 (19%)
PTPc-N9 529..799 CDD:350391 97/289 (34%)
Ptpn13XP_038948202.1 KIND 3..190 CDD:214801
FERM_F1_PTPN13 564..659 CDD:340715
B41 566..774 CDD:214604
PH-like 770..870 CDD:473070
PDZ1_PTPN13-like 1081..1172 CDD:467285
PTN13_u3 1168..1356 CDD:465189
PDZ2-PTPN13_FRMPD2-like 1354..1445 CDD:467254
PDZ3_PTPN13_FRMPD2-like 1494..1583 CDD:467181
PDZ4_PTPN13-like 1767..1851 CDD:467182 16/99 (16%)
PDZ5_PTPN13-like 1862..1948 CDD:467183 19/105 (18%)
PTPc-N13 2216..2449 CDD:350445 90/253 (36%)
Blue background indicates that the domain is not in the aligned region.

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